Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_A08_e537_02.seq
         (1482 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    26   2.4  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    24   9.8  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 26.2 bits (55), Expect = 2.4
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = +3

Query: 120 VYSSTVPIGATPEYLAGHYILQGASSFLPVMALAPQENERILDMCAAPGGKASHI 284
           V+ STVP G     +AG   +   S + P  +L+PQE ER+L+         SH+
Sbjct: 69  VWGSTVP-GLVAAKVAG---IDFISVYAPP-SLSPQEYERLLEAVELEASSHSHV 118


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 9.8
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = +3

Query: 675 KRRNVKLVPTGLDFGTEG--FVKYRHHRFHP-SLKLT 776
           +R  V L  TGLDFG EG  F  + H +  P + +LT
Sbjct: 455 QRSQVDLA-TGLDFGPEGNVFASFTHLQHAPFTFRLT 490


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,248,803
Number of Sequences: 2352
Number of extensions: 25282
Number of successful extensions: 87
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 173124270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)