Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_A08_e537_02.seq
         (1482 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   6.7  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   8.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   8.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   8.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   8.9  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 630 SILPEENEWVVNYALKRRNVKLVPTGL 710
           ++L E + W V   L ++ +K VPT L
Sbjct: 236 TLLSETDIWEVEQILAKKEIKGVPTYL 262


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -1

Query: 291 LQRYVMLYHPEQH 253
           ++RY+ +YHP +H
Sbjct: 130 IERYLAIYHPLRH 142


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -3

Query: 127 LYTTSPTLLHLPTGSKPRPNXL 62
           LY+  P LLHL      RPN L
Sbjct: 660 LYSKRPDLLHLFGSWSNRPNLL 681


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -3

Query: 127 LYTTSPTLLHLPTGSKPRPNXL 62
           LY+  P LLHL      RPN L
Sbjct: 660 LYSKRPDLLHLFGSWSNRPNLL 681


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -3

Query: 127 LYTTSPTLLHLPTGSKPRPNXL 62
           LY+  P LLHL      RPN L
Sbjct: 660 LYSKRPDLLHLFGSWSNRPNLL 681


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 341,842
Number of Sequences: 438
Number of extensions: 6985
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 51678000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)