Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_A07_e529_01.seq
(1524 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 228 1e-59
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 137 5e-45
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 101 2e-21
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 2e-17
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 7e-10
SB_56184| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.002
SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16) 31 2.4
SB_48670| Best HMM Match : AT_hook (HMM E-Value=3) 30 4.2
SB_54490| Best HMM Match : AMP-binding (HMM E-Value=4.2039e-45) 30 5.6
SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20) 30 5.6
SB_54491| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.8
SB_47813| Best HMM Match : HEAT (HMM E-Value=5.9e-06) 29 9.8
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 228 bits (557), Expect = 1e-59
Identities = 105/193 (54%), Positives = 135/193 (69%)
Frame = +2
Query: 152 KREDLFITSKLWNTFHRPDLXRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTDAD 331
+R+DLFITSKLWNT H P R SL++L +DYLDLYLIHWP ++++ D FP D
Sbjct: 67 ERKDLFITSKLWNTKHNPKDVRSNCVDSLKDLGLDYLDLYLIHWPLSFRDGDEFFPKDEQ 126
Query: 332 GKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQVECHPX 511
G + ++ D DTWKA+E LV GLV+++G+SNFNSKQ+ I A +KPV NQVECHP
Sbjct: 127 GNVLYAYHDPCDTWKAMEKLVDEGLVKAIGLSNFNSKQVDDICAIARIKPVANQVECHPL 186
Query: 512 LNQKRLKQFCEDRDIMITAYSPLGSPDRPWAKPGDPQLMEDPKLKEIADRLGKTVAQVLI 691
LNQ +L + +I AYSPLGS DRPWAKP DP +M DP + +ADR +TVAQ+ I
Sbjct: 187 LNQAKLIDHHKKHNIQTIAYSPLGSLDRPWAKPDDPHVMRDPTMVAMADRYSRTVAQICI 246
Query: 692 RYQIDRGNIXIPE 730
R+QI RG + IP+
Sbjct: 247 RFQIQRGVLVIPK 259
Score = 47.6 bits (108), Expect = 3e-05
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = +3
Query: 726 PKSVTKSRIASNFDVFDFKLSLQDVALIDXHRLXWAAWFP 845
PKSVT RI SNF VFDF+LS +D+A I+ W A P
Sbjct: 258 PKSVTPERIKSNFQVFDFELSAEDMATIEGLNRDWRACLP 297
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 137 bits (332), Expect(2) = 5e-45
Identities = 63/133 (47%), Positives = 93/133 (69%)
Frame = +2
Query: 152 KREDLFITSKLWNTFHRPDLXRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTDAD 331
KRE+LF+TSKLW H PD A + +L+NL +DYLDLYLIH P A+K+ + + A+
Sbjct: 108 KREELFVTSKLWCDSHHPDDVLPACQATLKNLQLDYLDLYLIHIPVAFKKGVRLPHSIAE 167
Query: 332 GKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQVECHPX 511
G I ++ +TW+A+E LV GL +++GVSNF+ K+L ++L+ AS+ P NQVE HP
Sbjct: 168 GIIGYTPEGVQNTWQAMEGLVAKGLCKAIGVSNFSVKRLNKLLETASIVPACNQVELHPY 227
Query: 512 LNQKRLKQFCEDR 550
L Q++LK+FC+ +
Sbjct: 228 LPQEKLKEFCDSK 240
Score = 63.3 bits (147), Expect(2) = 5e-45
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Frame = +2
Query: 524 RLKQFCEDRDIMITAYSPLGSPDRPWAKPG---DPQLMEDPKLKEIADRLGKTVAQVLIR 694
+ K FC+ + I++TAYSPLG+P R K +P++ME+P +KEIA + +VA+VL+R
Sbjct: 280 KCKDFCDSKGILLTAYSPLGNPGRLVPKERLEREPKVMEEPVIKEIAAKHNCSVARVLLR 339
Query: 695 YQIDRGNIXIPE 730
+ I RG +P+
Sbjct: 340 WGIQRGYPVLPK 351
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 101 bits (242), Expect = 2e-21
Identities = 63/192 (32%), Positives = 98/192 (51%)
Frame = +2
Query: 155 REDLFITSKLWNTFHRPDLXRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTDADG 334
R ++++ +K++ T H A SL L + Y+DLYLIH+P P+ G
Sbjct: 126 RCEIYVVTKVYFTEHGYKETMDAFYKSLTRLGLGYVDLYLIHFP---------VPSGVVG 176
Query: 335 KIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQVECHPXL 514
+W+A+ L GL+RS+GVSNFN + L+ + V P NQ+E HP L
Sbjct: 177 -----------SWQAMIDLRSRGLIRSIGVSNFNIQHLEALRQQTGVVPAVNQIEVHPFL 225
Query: 515 NQKRLKQFCEDRDIMITAYSPLGSPDRPWAKPGDPQLMEDPKLKEIADRLGKTVAQVLIR 694
K L Q+C+ +I I A+SPL ++ + DP L +A + KT AQ+L+R
Sbjct: 226 QMKELTQYCKRHNITIQAFSPLTKGEK----------LCDPILSYVAKKYNKTTAQILVR 275
Query: 695 YQIDRGNIXIPE 730
+ + +G IP+
Sbjct: 276 WSLQKGYACIPK 287
Score = 31.9 bits (69), Expect = 1.4
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 726 PKSVTKSRIASNFDVFDFKLSLQDVALID 812
PKS RI N VFDF + + D+ LID
Sbjct: 286 PKSAQLERIKENAKVFDFSIDMADMELID 314
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 88.2 bits (209), Expect = 2e-17
Identities = 59/191 (30%), Positives = 100/191 (52%)
Frame = +2
Query: 155 REDLFITSKLWNTFHRPDLXRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTDADG 334
R+D+FI +KL + + ++E+SLR L+ DY+DL+LIH K D T A+G
Sbjct: 390 RKDIFIITKLHPRYLGYEPTLKSVEMSLRALSTDYIDLFLIH----SKTCDDFLLTCAEG 445
Query: 335 KIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQVECHPXL 514
+ + + + ++WKA+E L G +RSLGVSNFN +LQ +++ A+V Q P
Sbjct: 446 EPRGT---WKESWKAMEELHRQGKIRSLGVSNFNVDELQELVNFATVPVSAVQNWFDPFH 502
Query: 515 NQKRLKQFCEDRDIMITAYSPLGSPDRPWAKPGDPQLMEDPKLKEIADRLGKTVAQVLIR 694
++ ++FC I YS LG+ + +++ EI+ ++QV++R
Sbjct: 503 QDRKARRFCNKHGIRYIGYSTLGTQWVYFHGLKTNPVLQSKVFSEISSHYEYVISQVVLR 562
Query: 695 YQIDRGNIXIP 727
+ I + IP
Sbjct: 563 WAIHQNVTVIP 573
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 62.9 bits (146), Expect = 7e-10
Identities = 42/143 (29%), Positives = 69/143 (48%)
Frame = +2
Query: 152 KREDLFITSKLWNTFHRPDLXRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTDAD 331
KRED+++T+KL + + S++ L+I Y+DL+LIH P+
Sbjct: 83 KREDIYVTTKLKPSEEGHSNALKYAKESIKKLDIGYVDLFLIHTPRP------------- 129
Query: 332 GKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQVECHPX 511
G I + + AL L GL+RS+GVSNF L+ + P NQ+E +P
Sbjct: 130 GNI-------IAAYDALLTLKEEGLIRSVGVSNFGVHHLEELRKAGCRTPAINQIEINPF 182
Query: 512 LNQKRLKQFCEDRDIMITAYSPL 580
Q+ + ++C I + Y+P+
Sbjct: 183 WRQEEIIKYCNKHGITVEGYAPV 205
>SB_56184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 41.5 bits (93), Expect = 0.002
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Frame = +2
Query: 344 FSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQVE---CHPXL 514
+SD Y+D L L G ++ + ++NF++ ++Q I D+ +K +NQ++
Sbjct: 32 YSDKRYLDALLHLSELQSEGKIQEISLTNFDTNRMQEITDH-GIKISSNQIQFSLIDRRA 90
Query: 515 NQKRLKQFCEDRDIMITAYSPL 580
N+K +K FC D I + AY +
Sbjct: 91 NEKMVK-FCLDHGISLLAYGTI 111
>SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16)
Length = 195
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 227 EVSLRNLNIDYLDLYLIHW 283
E SL L ID +DLYL+HW
Sbjct: 49 EKSLERLGIDRIDLYLLHW 67
>SB_48670| Best HMM Match : AT_hook (HMM E-Value=3)
Length = 207
Score = 30.3 bits (65), Expect = 4.2
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +2
Query: 317 PTDADGKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQV 496
P + K + SD+ +V T ++P+ LV +LGV KQ + D A + V+N
Sbjct: 142 PNTKEAKARESDIHFVVTLTVVQPVDTEALVMALGVP---LKQKLSVTDRALLFRVSNHA 198
Query: 497 E 499
E
Sbjct: 199 E 199
>SB_54490| Best HMM Match : AMP-binding (HMM E-Value=4.2039e-45)
Length = 565
Score = 29.9 bits (64), Expect = 5.6
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 377 ALEPLVCHGLVRSLGVSNFNSKQLQRILD 463
A E + C G++RSL + N ++Q+QR D
Sbjct: 104 ASEEIKCRGVIRSLRIENKQAEQVQRATD 132
>SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20)
Length = 1803
Score = 29.9 bits (64), Expect = 5.6
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = -1
Query: 444 CFELKFETPRLRTSPWHTRGSRAFHVST*STSENWIL 334
C++L+F+ P TS H RG+R ++T T ++W++
Sbjct: 1169 CWDLRFQLPI--TSLSHPRGARIRRLATHPTEQSWVV 1203
>SB_54491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 29.1 bits (62), Expect = 9.8
Identities = 14/68 (20%), Positives = 30/68 (44%)
Frame = +2
Query: 281 WPQAYKEDDAIFPTDADGKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRIL 460
W + E ++FP + Y TW++L+P + + + + + SK +RI
Sbjct: 69 WSFDWDEGASLFPDFFPRSTTAKTLSYEVTWRSLDPAKEYSMAKDIFRDSILSKDTERIE 128
Query: 461 DNASVKPV 484
++ K +
Sbjct: 129 PDSEAKQI 136
>SB_47813| Best HMM Match : HEAT (HMM E-Value=5.9e-06)
Length = 623
Score = 29.1 bits (62), Expect = 9.8
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +2
Query: 242 NLNIDYLDLYLIHWPQAYKEDDAIFPTDADGKIQFSDVDYVDTWKALEPLVCHGLVRSLG 421
NL +D+L LI + KE +A G++ D WKA+EP V + +
Sbjct: 376 NLPLDHLQQKLIQETEKLKEIAPHLTQEAAGQVPVVAGRPKDVWKAMEPEVRATVQEHIA 435
Query: 422 VSNFNSKQLQRILD-NASVKPVTNQVE 499
S L+ D N + + + NQ +
Sbjct: 436 RDEGESPSLEDAEDANPTPESMDNQAD 462
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,862,567
Number of Sequences: 59808
Number of extensions: 593332
Number of successful extensions: 1220
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 4953341894
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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