Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_A07_e529_01.seq
         (1524 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      27   1.4  
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    25   4.4  

>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 27.1 bits (57), Expect = 1.4
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = +1

Query: 343 VLGCGLRGHVEGSRASRVPRARPQPRCLELQLEAAPEDTRQRLCETSH 486
           VL C   GH  G+  +     RP   C         E+T+Q + E SH
Sbjct: 71  VLTCYCEGHCPGNLQNGTCETRPGGSCFVSVEAVLDEETKQLVPEYSH 118


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 25.4 bits (53), Expect = 4.4
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = +1

Query: 55  GCRXFGTRAHLSMETSK-EVGEAIKTKIQEGVV*KGRFIHNFEAL 186
           GC  FG   HL+  T K +VG  +K+      +     I  FE L
Sbjct: 377 GCTIFGILGHLAHVTGKTDVGNVVKSDAGLAFISYPEAIAKFEVL 421


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,082,417
Number of Sequences: 2352
Number of extensions: 18553
Number of successful extensions: 40
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 178813800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)