Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_A07_e529_01.seq
(1524 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 194 1e-49
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 194 1e-49
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 165 1e-40
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 161 2e-39
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 122 7e-28
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 113 3e-25
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 112 7e-25
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 97 4e-20
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 95 1e-19
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 94 3e-19
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 85 9e-17
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 75 1e-13
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 55 2e-07
AC006627-8|AAK85458.1| 276|Caenorhabditis elegans Hypothetical ... 38 0.019
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 32 1.2
AF016438-7|AAQ62454.1| 451|Caenorhabditis elegans Nuclear hormo... 31 2.8
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 194 bits (473), Expect = 1e-49
Identities = 88/194 (45%), Positives = 127/194 (65%), Gaps = 1/194 (0%)
Frame = +2
Query: 152 KREDLFITSKLWNTFHRPDLXRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTDAD 331
KRE+LFITSK+WNTFH +++ L +L + Y+DL LIHWPQ Y E +FP +
Sbjct: 69 KREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAELFPAGEN 128
Query: 332 GKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQVECHPX 511
GK+++SDVDY++TWKA E G RS+G+SNF Q+QR+ D A VKP QVE HP
Sbjct: 129 GKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKPACLQVELHPY 188
Query: 512 LNQKRLKQFCEDRDIMITAYSPLGSPDRP-WAKPGDPQLMEDPKLKEIADRLGKTVAQVL 688
Q +L++FC+++ I++ YSPLG+P + K GDP ++ + + IA GKT AQ++
Sbjct: 189 FTQVKLREFCKEKGIVVVGYSPLGNPGSAFFRKDGDPNVLTNEVVAGIAKAHGKTPAQII 248
Query: 689 IRYQIDRGNIXIPE 730
+R+ +D G IP+
Sbjct: 249 LRWFVDSGLSAIPK 262
Score = 37.9 bits (84), Expect = 0.019
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +3
Query: 726 PKSVTKSRIASNFDVFDFKLSLQDVALIDXHRLXWAAWFP*RRXSD 863
PKSVT RI N V DF+LS +++ ID W P R D
Sbjct: 261 PKSVTPQRIIENISVIDFQLSAEEIQAIDGVNRGWRLVDPSPRDGD 306
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 194 bits (473), Expect = 1e-49
Identities = 88/194 (45%), Positives = 127/194 (65%), Gaps = 1/194 (0%)
Frame = +2
Query: 152 KREDLFITSKLWNTFHRPDLXRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTDAD 331
KRE+LFITSK+WNTFH +++ L +L + Y+DL LIHWPQ Y E +FP +
Sbjct: 69 KREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAELFPAGEN 128
Query: 332 GKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQVECHPX 511
GK+++SDVDY++TWKA E G RS+G+SNF Q+QR+ D A VKP QVE HP
Sbjct: 129 GKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKPACLQVELHPY 188
Query: 512 LNQKRLKQFCEDRDIMITAYSPLGSPDRP-WAKPGDPQLMEDPKLKEIADRLGKTVAQVL 688
Q +L++FC+++ I++ YSPLG+P + K GDP ++ + + IA GKT AQ++
Sbjct: 189 FTQVKLREFCKEKGIVVVGYSPLGNPGSAFFRKDGDPNVLTNEVVAGIAKAHGKTPAQII 248
Query: 689 IRYQIDRGNIXIPE 730
+R+ +D G IP+
Sbjct: 249 LRWFVDSGLSAIPK 262
Score = 38.3 bits (85), Expect = 0.014
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +3
Query: 726 PKSVTKSRIASNFDVFDFKLSLQDVALIDXHRLXW 830
PKSVT RI+ N VFDF+L+ ++++ ID W
Sbjct: 261 PKSVTPQRISENLAVFDFQLTAEEISKIDGINKNW 295
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 165 bits (400), Expect = 1e-40
Identities = 85/200 (42%), Positives = 124/200 (62%), Gaps = 7/200 (3%)
Frame = +2
Query: 152 KREDLFITSKLWNTFHRPDLXRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIF-PTDA 328
KRED+F+TSKL T H P+ +E L+ L ++Y+DLYLIH P +K + F P
Sbjct: 71 KREDIFVTSKLPFTAHAPEDVPKCVESQLKALQLEYIDLYLIHCPFPFKHQEGSFAPLME 130
Query: 329 DGKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQVECHP 508
+G++ +++ ++DTW+ALE L G +++LGVSNF+ QLQ + D A VKP QVECH
Sbjct: 131 NGELAVTEIAHIDTWRALEKLYKEGKLKALGVSNFSCNQLQALYDAAEVKPANQQVECHI 190
Query: 509 XLNQKRLKQFCEDRDIMITAYSPLGSPDRPWAKP------GDPQLMEDPKLKEIADRLGK 670
Q+ L+ C+ + +TAY+PLGSP R A+P GDP L +P +K++A + K
Sbjct: 191 YWPQQELRALCKKLGVTVTAYAPLGSPGRKAARPDGVWPEGDPLL--EPIVKQLAAKYHK 248
Query: 671 TVAQVLIRYQIDRGNIXIPE 730
T AQ+LIR+ G IP+
Sbjct: 249 TAAQILIRHLTQHGISTIPK 268
Score = 32.7 bits (71), Expect = 0.70
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 726 PKSVTKSRIASNFDVFDFKLSLQDV 800
PKSV+ RI N FDFKLS +D+
Sbjct: 267 PKSVSPDRIVENISTFDFKLSDEDM 291
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 161 bits (390), Expect = 2e-39
Identities = 75/191 (39%), Positives = 123/191 (64%), Gaps = 6/191 (3%)
Frame = +2
Query: 152 KREDLFITSKLWNTFHRPDLXRGALEVSLRNLNIDYLDLYLIHWPQAYKEDD-----AIF 316
+RE+LF++SK+WNT+H + ++ L Y+DL +IHWP + ED+ ++
Sbjct: 71 RREELFLSSKIWNTYHSRNRCMQQIDEMLEIFETTYMDLIVIHWPFGWAEDEPPGERGLW 130
Query: 317 PTDADGKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQV 496
P A+GK+++SDVDY++TWKALE G +RS+G++NFN Q++++ +KP QV
Sbjct: 131 PRGANGKMRYSDVDYLETWKALEDAHRSGKIRSIGLANFNIGQVEQVWTKGLIKPAVLQV 190
Query: 497 ECHPXLNQKRLKQFCEDRDIMITAYSPLGSPDRP-WAKPGDPQLMEDPKLKEIADRLGKT 673
E +P L+Q+ ++QFC ++ I++TA+ G+P + K DP L+ + L+ IA GK+
Sbjct: 191 EMNPFLDQEEIRQFCREKGIILTAFMLTGNPGSALYRKHEDPNLLYNETLQSIAKGHGKS 250
Query: 674 VAQVLIRYQID 706
V QVL+R+ ID
Sbjct: 251 VVQVLVRWAID 261
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 122 bits (294), Expect = 7e-28
Identities = 77/204 (37%), Positives = 111/204 (54%), Gaps = 11/204 (5%)
Frame = +2
Query: 152 KREDLFITSKLWNTFHRPDLXRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTDAD 331
KRED+FIT+K + PD+ AL SL+ L +DY+DLYL H P + K+D
Sbjct: 72 KREDIFITTKAFCHEVAPDVVEEALRNSLKRLRLDYVDLYLAHIPASTKDD--------- 122
Query: 332 GKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQVECHPX 511
G + SDV D W+ E + GL +++GVSNFN Q+ RI++ V +Q+E H
Sbjct: 123 GSFR-SDVKVEDIWRGFEKVYGLGLTKAIGVSNFNESQIVRIMNIQKVPIHASQLELHLY 181
Query: 512 LNQKRLKQFCEDRDIMITAYSPLGSPDR--PWAKPGDPQL---------MEDPKLKEIAD 658
L QK ++ C+ +I+ITAY+ LGSP R G P M D +K +A
Sbjct: 182 LPQKAHRELCKKHNILITAYATLGSPGRMSVVGSNGRPLFESTQNSENEMNDKHVKALAQ 241
Query: 659 RLGKTVAQVLIRYQIDRGNIXIPE 730
+ KT AQ+L+R ++ G I IP+
Sbjct: 242 KYSKTPAQILLRATVEMGIIVIPK 265
Score = 31.1 bits (67), Expect = 2.1
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 726 PKSVTKSRIASNFDVFDFKLSLQDVALIDXH 818
PK+ R+ N ++FDF +S +V L++ H
Sbjct: 264 PKTTNPERMKENINIFDFNISNAEVNLLEAH 294
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 113 bits (272), Expect = 3e-25
Identities = 73/203 (35%), Positives = 109/203 (53%), Gaps = 10/203 (4%)
Frame = +2
Query: 152 KREDLFITSKLWNTFHRPDLXRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTDAD 331
KRE+LFIT+K W P G L SL+ L ++Y+DLYL H P A+ +D +
Sbjct: 72 KREELFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSEHIA--- 128
Query: 332 GKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTN-QVECHP 508
S V+ D W+ + + GL +++GVSN+N+ Q+ R L + PV N QVE H
Sbjct: 129 -----SPVE--DVWRQFDAVYKAGLAKAVGVSNWNNDQISRALA-LGLTPVHNSQVELHL 180
Query: 509 XLNQKRLKQFCEDRDIMITAYSPLGSPDR-----PWAKPGD----PQLMEDPKLKEIADR 661
Q FC+ +I +T+Y+ LGSP R P + D P ++D + +A++
Sbjct: 181 YFPQHDHVDFCKKHNISVTSYATLGSPGRVNFTLPTGQKLDWAPAPSDLQDQNVLALAEK 240
Query: 662 LGKTVAQVLIRYQIDRGNIXIPE 730
KT AQVL+RY +DRG +P+
Sbjct: 241 THKTPAQVLLRYALDRGCAILPK 263
Score = 37.5 bits (83), Expect = 0.025
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +3
Query: 726 PKSVTKSRIASNFDVFDFKLSLQDVALID 812
PKS+ ++RI NF+VFDF L+ +D+A ++
Sbjct: 262 PKSIQENRIKENFEVFDFSLTEEDIAKLE 290
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 112 bits (269), Expect = 7e-25
Identities = 67/192 (34%), Positives = 108/192 (56%)
Frame = +2
Query: 152 KREDLFITSKLWNTFHRPDLXRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTDAD 331
KRED++ITSKL + R ++E SL NL ++YLDL LIHWP + + + A+
Sbjct: 68 KREDIWITSKLAPSNAGVKKARESIEESLSNLKVEYLDLLLIHWPGSSLKSE----NPAN 123
Query: 332 GKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQVECHPX 511
K++ V++W + ++ G +RS+GVSNF L+ + +++V P NQVE HP
Sbjct: 124 KKLR------VESWNVMCEMMAEGKLRSVGVSNFEICHLEELKKDSNVVPAVNQVEYHPH 177
Query: 512 LNQKRLKQFCEDRDIMITAYSPLGSPDRPWAKPGDPQLMEDPKLKEIADRLGKTVAQVLI 691
+Q L ++C + +I AYS LGSP + K QL E+P +KE+A + + +L+
Sbjct: 178 FHQDDLVKYCNENNIHFQAYSSLGSP--TYRK----QLSEEPLIKELAQKYNVEIPVLLL 231
Query: 692 RYQIDRGNIXIP 727
+ +G +P
Sbjct: 232 GFAYCQGISVLP 243
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 96.7 bits (230), Expect = 4e-20
Identities = 63/195 (32%), Positives = 98/195 (50%)
Frame = +2
Query: 146 SCKREDLFITSKLWNTFHRPDLXRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTD 325
S RE++F+++KLW D A + S L DYLD+Y+IH PQ D + +
Sbjct: 63 SVPREEMFLSTKLWPV-DCGDEVYNAFQTSCEKLQTDYLDMYMIHMPQL--PDWIVNQKE 119
Query: 326 ADGKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQVECH 505
K TW+ +E L VRS+GVSN++ + L +L+ AS+ P NQVE H
Sbjct: 120 TKEK----------TWRQMELLYEDEHVRSIGVSNYSIEDLDELLEFASILPHANQVELH 169
Query: 506 PXLNQKRLKQFCEDRDIMITAYSPLGSPDRPWAKPGDPQLMEDPKLKEIADRLGKTVAQV 685
P +Q LK +C++ I+ Y PL + +ED L +IA + K+ AQ+
Sbjct: 170 PWFHQADLKNYCDELGILTMGYCPLAK----------GKYLEDETLCKIASKYQKSPAQI 219
Query: 686 LIRYQIDRGNIXIPE 730
+R+ I + +P+
Sbjct: 220 CLRWSIQQNVPTVPK 234
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 95.1 bits (226), Expect = 1e-19
Identities = 60/191 (31%), Positives = 104/191 (54%), Gaps = 1/191 (0%)
Frame = +2
Query: 155 REDLFITSKLW-NTFHRPDLXRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTDAD 331
R D+F+TSK + + + + RG +E SL++L DY+D+YL+H+P+ D+ D
Sbjct: 78 RSDVFLTSKFFPESKNCREACRGFVEESLQSLQTDYIDMYLVHYPKPNDSDN-----DDV 132
Query: 332 GKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQVECHPX 511
++ + Y + LE G VRS+GVSN+ L+ + A V P NQ+E HP
Sbjct: 133 NNAEYRKIAY----EVLEEAKAAGKVRSIGVSNYEIVHLEELKTYAKVPPCANQLEYHPH 188
Query: 512 LNQKRLKQFCEDRDIMITAYSPLGSPDRPWAKPGDPQLMEDPKLKEIADRLGKTVAQVLI 691
+ L+++C++++I A+S L + P+L+EDP + E+A + +V VL+
Sbjct: 189 FARIPLQKYCKEKNIFFQAFSSLARHE--------PKLIEDPVVVELAKKHNTSVPLVLL 240
Query: 692 RYQIDRGNIXI 724
+ + R N+ I
Sbjct: 241 AWAL-RQNVGI 250
Score = 32.3 bits (70), Expect = 0.93
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 726 PKSVTKSRIASNFDVFDFKLSLQDV 800
PKSVT SRI NF V D L+ +D+
Sbjct: 252 PKSVTPSRIVENFKVIDIALTPEDI 276
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 93.9 bits (223), Expect = 3e-19
Identities = 57/182 (31%), Positives = 98/182 (53%), Gaps = 2/182 (1%)
Frame = +2
Query: 158 EDLFITSKL--WNTFHRPDLXRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTDAD 331
ED+++TSK+ +++ + +L R + SL L+ YLDL L+H+P+ P D +
Sbjct: 68 EDIYLTSKVFPYSSKNAAELIRKDVNESLELLDRKYLDLVLVHYPR---------PLDTE 118
Query: 332 GKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQVECHPX 511
+ + + DTW ALE L G +RS+GVSN+ ++ + +++P NQ+E HP
Sbjct: 119 DLNENNKMYRKDTWIALEKLHAEGKIRSIGVSNYEPHHIEEMRSYITIEPQVNQIEYHPH 178
Query: 512 LNQKRLKQFCEDRDIMITAYSPLGSPDRPWAKPGDPQLMEDPKLKEIADRLGKTVAQVLI 691
+K L+ +C +I+ A+SPLG G+ L+ D ++ IA TVA V++
Sbjct: 179 FQRKVLRAYCNKNEILFQAFSPLGR--------GNKTLLGDSTMERIALCHKTTVANVIL 230
Query: 692 RY 697
+
Sbjct: 231 AW 232
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 85.4 bits (202), Expect = 9e-17
Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 1/193 (0%)
Frame = +2
Query: 155 REDLFITSKLWNTFHRP-DLXRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTDAD 331
RED+FIT+K+ + L SL L DY+DL LIH+P+ D D D
Sbjct: 78 REDVFITTKVRTLNENTVEETEKQLANSLATLQTDYVDLLLIHYPR-----DRDTGNDDD 132
Query: 332 GKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQVECHPX 511
+I S V W+ LE G VRS+GVSN+ L + + A ++PV NQ E P
Sbjct: 133 YEINKSRRKIV--WQTLEKAKESGRVRSIGVSNYEVYHLVEMFEYAKIRPVLNQYEYQPY 190
Query: 512 LNQKRLKQFCEDRDIMITAYSPLGSPDRPWAKPGDPQLMEDPKLKEIADRLGKTVAQVLI 691
L + LK+FC+ +I++ +YS L W GD +++++ L ++ + +T +L
Sbjct: 191 LTRPTLKKFCDLNNIVVQSYSSL-----CW---GDKEILQEKPLVDLCQKYNQTPQAILY 242
Query: 692 RYQIDRGNIXIPE 730
+ IP+
Sbjct: 243 AFAHCSNTSMIPK 255
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 74.9 bits (176), Expect = 1e-13
Identities = 49/145 (33%), Positives = 75/145 (51%), Gaps = 2/145 (1%)
Frame = +2
Query: 152 KREDLFITSKLW-NTFHRPDLXRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTDA 328
KRED+FIT+K+ NT + ++ SL L Y+D+YLIH+P+++ D P +
Sbjct: 67 KREDIFITTKMHPNTVEN---VKKLVDESLSLLKTSYIDMYLIHYPKSFDYGDQD-PMNK 122
Query: 329 DGKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILD-NASVKPVTNQVECH 505
+I TW L G +RS+GVS+F + L+ + D + P NQVE H
Sbjct: 123 TLRIA--------TWNDLWECKNAGKIRSVGVSSFEIRHLEELKDLGKNFPPCCNQVEYH 174
Query: 506 PXLNQKRLKQFCEDRDIMITAYSPL 580
P ++ LK +C+ I A+S L
Sbjct: 175 PHFTREELKNYCKSEGIFFQAFSSL 199
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 54.8 bits (126), Expect = 2e-07
Identities = 31/89 (34%), Positives = 50/89 (56%)
Frame = +2
Query: 185 WNTFHRPDLXRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTDADGKIQFSDVDYV 364
W P GAL SL+ L+++Y+DLYL H P A+ + D KI+ S V+
Sbjct: 53 WTNELAPGRLEGALRDSLKKLHLEYVDLYLAHMPTAFSD-------DMSQKIE-SSVE-- 102
Query: 365 DTWKALEPLVCHGLVRSLGVSNFNSKQLQ 451
D W+ + + GL +++GVSN+N+ Q++
Sbjct: 103 DIWRQFDAVYKAGLAKAVGVSNWNNDQIR 131
>AC006627-8|AAK85458.1| 276|Caenorhabditis elegans Hypothetical
protein E01A2.1 protein.
Length = 276
Score = 37.9 bits (84), Expect = 0.019
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 380 LEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQVECHPXLN-QKRLKQFCEDRDI 556
+E LV + S+GVS+F+++QL+ I+D+ VKP N V L+ D D+
Sbjct: 149 MEKLVETSEIASIGVSDFSARQLKTIIDHFDVKPSINHVRLDGCCQVPPELQALANDNDV 208
Query: 557 MITAYS 574
+ ++
Sbjct: 209 QLLVHN 214
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 569 YSPLGSPDRPWAKPGDPQLMEDPKLKEIADRLGKTVAQVLIRYQIDRGNIXIP 727
Y G R W P PQ+ DP+ + +RL + + + +Y+ R I P
Sbjct: 46 YKQCGPSGRVWIVPCAPQMTFDPEDRVCKERLDSRIVKPMRKYETSRTIITTP 98
>AF016438-7|AAQ62454.1| 451|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 128, isoform b protein.
Length = 451
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 418 RCLELQLEAAPEDTRQRLCETSH*PGRMPSXFKPEAIEAVLRRPXY 555
RCLE+ ++A+ + + L +SH G+ S P+++ L RP +
Sbjct: 114 RCLEVGMDASKFQSNRDLISSSHSFGKPKSLNLPQSLSTFLGRPAF 159
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,116,021
Number of Sequences: 27780
Number of extensions: 431295
Number of successful extensions: 1046
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4379894956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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