Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_A04_e505_02.seq
         (1418 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000498EE7 Cluster: importin; n=1; Entamoeba histoly...    36   3.4  
UniRef50_Q4A5U5 Cluster: Putative uncharacterized protein; n=1; ...    35   4.5  
UniRef50_Q8ILC5 Cluster: Putative uncharacterized protein; n=2; ...    35   4.5  
UniRef50_UPI00015B4747 Cluster: PREDICTED: similar to ENSANGP000...    35   6.0  

>UniRef50_UPI0000498EE7 Cluster: importin; n=1; Entamoeba
           histolytica HM-1:IMSS|Rep: importin - Entamoeba
           histolytica HM-1:IMSS
          Length = 980

 Score = 35.5 bits (78), Expect = 3.4
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -3

Query: 750 KYVVFSNLPMFQ*NYGLLNLFY-NRTHYFQYPFKYNNQNVPNKMPSQLHNIKSNTRS 583
           KY++++ +P F  N   ++LFY N   + Q PF +NN +  N   S L  +   T S
Sbjct: 199 KYIIYTKVPSFF-NKETIDLFYTNAIAFLQQPFTFNNNDEKNAQCSSLIGLIRGTSS 254


>UniRef50_Q4A5U5 Cluster: Putative uncharacterized protein; n=1;
           Mycoplasma synoviae 53|Rep: Putative uncharacterized
           protein - Mycoplasma synoviae (strain 53)
          Length = 152

 Score = 35.1 bits (77), Expect = 4.5
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = -3

Query: 756 RPKYVVFSNLPMFQ*NYGLLNLFYNRTHYFQYPFKYNNQNVPNKMPSQLHNIKSN 592
           + +Y +F +  + Q N G +NL+YN+  YF Y     N+N   K+  +   +K N
Sbjct: 53  KKEYFIFFDSLLIQSNKGQINLYYNQ-EYFVYEQNDKNKNELKKLNQEYSKLKKN 106


>UniRef50_Q8ILC5 Cluster: Putative uncharacterized protein; n=2;
            cellular organisms|Rep: Putative uncharacterized protein
            - Plasmodium falciparum (isolate 3D7)
          Length = 2700

 Score = 35.1 bits (77), Expect = 4.5
 Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
 Frame = -3

Query: 828  HFTKFHSNF---KK*LITHKCNE*KLIRPKYVVFSNLPMFQ*NYGLLNLFYNRTHYFQYP 658
            HF+    N+    K L    C + K I+   ++  N+ M   N    N+FY + +YF Y 
Sbjct: 1114 HFSHMLFNYPYLSKFLTFLPCQKIKFIKNNILMNENIKMEHYN----NMFYEK-NYFNYF 1168

Query: 657  FKYNNQNVPNKMPSQLHNIKSNTRSKNKD*YITNHDS----FLDRKLPPRIAE 511
              Y+N N  N   +  +N  SN  S N +    N+ S    +LD K   +I E
Sbjct: 1169 NMYDNNNNNNNNNNNNNNNNSNNNSNNNNNNNNNNSSNQNNYLDDKNVKKINE 1221


>UniRef50_UPI00015B4747 Cluster: PREDICTED: similar to
           ENSANGP00000011164; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000011164 - Nasonia
           vitripennis
          Length = 713

 Score = 34.7 bits (76), Expect = 6.0
 Identities = 20/53 (37%), Positives = 27/53 (50%)
 Frame = +1

Query: 376 SEWGDFYSERTVAEMNNNCSISFSSLD*QFYFFWLKI*TSRKKIDLCDTWRQL 534
           + +GD+++ER   E N N SIS   LD   Y  W+   +    ID  DTW  L
Sbjct: 129 TSFGDYFTERFYREANENPSISKDKLDQIIY--WIH--SYHNSIDCTDTWYDL 177


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 976,405,403
Number of Sequences: 1657284
Number of extensions: 16156410
Number of successful extensions: 28884
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28826
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 149421664071
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)