Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_A04_e505_02.seq
         (1418 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   5.5  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   9.6  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 12/59 (20%), Positives = 32/59 (54%)
 Frame = +1

Query: 475 WLKI*TSRKKIDLCDTWRQLPIKKGIVVCYILVLIFTSSI*LYIM*L*WHFIWYILVIV 651
           W+++   +++  LC    ++ I + I+V  +++++ T  + + I  +   F+  IL +V
Sbjct: 716 WVEVWERKRRQYLCPVLLRVSILRNIIVGTLMMVLGTGCVRIKITGVWLKFLRVILSVV 774


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 572 SLFLLLVFDFILCNCDGILFGTFWLLYLKGY*K 670
           SL L ++   I+  C  I+  T W    KG+ K
Sbjct: 190 SLSLFIIPASIIATCYAIIIITIWSKNAKGFIK 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,976
Number of Sequences: 336
Number of extensions: 4800
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 42199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)