Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_A04_e505_02.seq
         (1418 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S80254-1|AAB35643.1|  508|Drosophila melanogaster crocodile prot...    32   2.2  
BT001793-1|AAN71548.1|  508|Drosophila melanogaster RH24787p pro...    32   2.2  
AE014296-3541|AAF51727.1|  508|Drosophila melanogaster CG5069-PA...    32   2.2  

>S80254-1|AAB35643.1|  508|Drosophila melanogaster crocodile
           protein.
          Length = 508

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -3

Query: 702 LLNLFYNRTHYFQYPFKYNNQNVPNKMPSQLHNI 601
           L+N++  R H+  YP+  N  N+     SQ+H++
Sbjct: 265 LMNVYNPRIHHSAYPYHLNEDNLATVASSQMHHV 298


>BT001793-1|AAN71548.1|  508|Drosophila melanogaster RH24787p
           protein.
          Length = 508

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -3

Query: 702 LLNLFYNRTHYFQYPFKYNNQNVPNKMPSQLHNI 601
           L+N++  R H+  YP+  N  N+     SQ+H++
Sbjct: 265 LMNVYNPRIHHSAYPYHLNEDNLATVASSQMHHV 298


>AE014296-3541|AAF51727.1|  508|Drosophila melanogaster CG5069-PA
           protein.
          Length = 508

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -3

Query: 702 LLNLFYNRTHYFQYPFKYNNQNVPNKMPSQLHNI 601
           L+N++  R H+  YP+  N  N+     SQ+H++
Sbjct: 265 LMNVYNPRIHHSAYPYHLNEDNLATVASSQMHHV 298


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,952,675
Number of Sequences: 53049
Number of extensions: 717175
Number of successful extensions: 1007
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 7802901504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)