Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_A03_e497_01.seq
         (1565 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    24   3.5  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    24   3.5  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    24   3.5  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   8.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   8.1  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   8.1  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   8.1  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
 Frame = +1

Query: 145 ARECAQSPDEPSCYNCNKTGHIARNCPEGGRDN-SNQTCYNCNKSGHISR 291
           A E        SC   N +  ++ NC   GR N +N+      K  H ++
Sbjct: 227 ALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELEKEFHFNK 276


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
 Frame = +1

Query: 145 ARECAQSPDEPSCYNCNKTGHIARNCPEGGRDN-SNQTCYNCNKSGHISR 291
           A E        SC   N +  ++ NC   GR N +N+      K  H ++
Sbjct: 16  ALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELEKEFHFNK 65


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
 Frame = +1

Query: 145 ARECAQSPDEPSCYNCNKTGHIARNCPEGGRDN-SNQTCYNCNKSGHISR 291
           A E        SC   N +  ++ NC   GR N +N+      K  H ++
Sbjct: 16  ALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELEKEFHFNK 65


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -3

Query: 396 LRVVGRVLIPLLVAVARDM 340
           L V+G V++P+++   +DM
Sbjct: 81  LGVIGNVMVPIVIFKTKDM 99


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -3

Query: 396 LRVVGRVLIPLLVAVARDM 340
           L V+G V++P+++   +DM
Sbjct: 81  LGVIGNVMVPIVIFKTKDM 99


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 580 PFSHSASVLLFHSFCKFF 527
           PF+ S  VL F+  C F+
Sbjct: 274 PFTQSPGVLGFNEICSFY 291


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = -2

Query: 937 LKGEXGTGPPLEXXXXXFTPASNLSF 860
           + GE   GPP        TP S  +F
Sbjct: 1   MSGEAHIGPPTPHESNTSTPVSKSAF 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,397
Number of Sequences: 336
Number of extensions: 4627
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 47217925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)