Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_A02_e489_02.seq
         (1427 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   4.2  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   7.3  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   7.3  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   7.3  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   7.3  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   7.3  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   7.3  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   7.3  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   7.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   9.7  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 840 LLTYNIYKXEYWS 878
           +L YN +K +YWS
Sbjct: 69  ILAYNFWKKKYWS 81


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -2

Query: 568 LSSHPASNCVRPSGLSLSRNHLMYGPGSPCSAVKHNDVSS 449
           LS+   SN  + SGL+   +     PG P ++    ++SS
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSS 168


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -2

Query: 568 LSSHPASNCVRPSGLSLSRNHLMYGPGSPCSAVKHNDVSS 449
           LS+   SN  + SGL+   +     PG P ++    ++SS
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSS 168


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -2

Query: 568 LSSHPASNCVRPSGLSLSRNHLMYGPGSPCSAVKHNDVSS 449
           LS+   SN  + SGL+   +     PG P ++    ++SS
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSS 168


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -2

Query: 568 LSSHPASNCVRPSGLSLSRNHLMYGPGSPCSAVKHNDVSS 449
           LS+   SN  + SGL+   +     PG P ++    ++SS
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSS 168


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -2

Query: 568 LSSHPASNCVRPSGLSLSRNHLMYGPGSPCSAVKHNDVSS 449
           LS+   SN  + SGL+   +     PG P ++    ++SS
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSS 168


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -2

Query: 568 LSSHPASNCVRPSGLSLSRNHLMYGPGSPCSAVKHNDVSS 449
           LS+   SN  + SGL+   +     PG P ++    ++SS
Sbjct: 85  LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSS 124


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -2

Query: 568 LSSHPASNCVRPSGLSLSRNHLMYGPGSPCSAVKHNDVSS 449
           LS+   SN  + SGL+   +     PG P ++    ++SS
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSS 168


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -2

Query: 568 LSSHPASNCVRPSGLSLSRNHLMYGPGSPCSAVKHNDVSS 449
           LS+   SN  + SGL+   +     PG P ++    ++SS
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSS 168


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = +3

Query: 495 PYIKWFLDKL-KPEGLTQLLAGWEDKSAEAVCTFAFCAGNCENLDVILFQGKTRGKIV 665
           P I  +L+K  KP      L  W D   +++  F F A N +   ++     T+  ++
Sbjct: 390 PEIITYLEKNGKPRTTDTFLDLWSDYQNKSLAAFDFVARNSDTPIILWTSHLTQADVI 447


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 272,149
Number of Sequences: 336
Number of extensions: 5460
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 42506375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)