Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_H12_e384_16.seq
         (1495 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127601-1|BAC87052.1|  415|Homo sapiens protein ( Homo sapiens ...    38   0.095
AK126884-1|BAC86735.1|  175|Homo sapiens protein ( Homo sapiens ...    33   2.7  
AK096940-1|BAC04906.1|  226|Homo sapiens protein ( Homo sapiens ...    32   4.7  
AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens ...    32   6.2  
AY437503-1|AAR92146.1|  108|Homo sapiens tumor differentiation f...    31   8.2  

>AK127601-1|BAC87052.1|  415|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45698 fis, clone FEBRA2017811. ).
          Length = 415

 Score = 37.9 bits (84), Expect = 0.095
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -3

Query: 665 FISLHKHIDKHTYTQAHTHTYIHVNI 588
           +I  H H   HTYT AHTH +IH+++
Sbjct: 96  YIQGHIHTHMHTYTHAHTHAHIHIHV 121



 Score = 35.5 bits (78), Expect = 0.51
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = -3

Query: 653 HKHIDKHTYTQAHTHTYIHVN 591
           H +  +HTYT AH+HTYIH++
Sbjct: 368 HIYAHRHTYTYAHSHTYIHMH 388



 Score = 34.3 bits (75), Expect = 1.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 662 ISLHKHIDKHTYTQAHTHTYIHVN 591
           I +H H   HT+T  H H +IH+N
Sbjct: 297 IHMHMHTHTHTHTYTHAHAHIHIN 320



 Score = 33.1 bits (72), Expect = 2.7
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 653 HKHIDKHTYTQAHTHTYIHVN 591
           H HI  H +T  HTHTY H +
Sbjct: 294 HAHIHMHMHTHTHTHTYTHAH 314



 Score = 32.3 bits (70), Expect = 4.7
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 656 LHKHIDKHTYTQAHTHTYIHVNI 588
           +H HI   T+T AHT+T+ H+++
Sbjct: 229 IHSHIHTWTHTHAHTYTHAHIHV 251



 Score = 31.9 bits (69), Expect = 6.2
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 647 HIDKHTYTQAHTHTYIHVN 591
           HI + TYT  HTHT +H N
Sbjct: 36  HIHRRTYTHRHTHTLMHTN 54



 Score = 31.5 bits (68), Expect = 8.2
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 656 LHKHIDKHTYTQAHTHTYIHVNI 588
           +H H+  HT+T  +TH + H++I
Sbjct: 297 IHMHMHTHTHTHTYTHAHAHIHI 319


>AK126884-1|BAC86735.1|  175|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44936 fis, clone BRAMY3018121. ).
          Length = 175

 Score = 33.1 bits (72), Expect = 2.7
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 662 ISLHKHIDKHTYTQAHTHTYIHVNI 588
           I +H H   H YTQAH H+   +NI
Sbjct: 41  IHMHTHTQTHIYTQAHIHSCTQINI 65


>AK096940-1|BAC04906.1|  226|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39621 fis, clone SMINT2001158. ).
          Length = 226

 Score = 32.3 bits (70), Expect = 4.7
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 653 HKHIDKHTYTQAHTHTYIHVN 591
           H H+  HT+  +HTH++IH N
Sbjct: 88  HAHMHSHTHIHSHTHSHIHSN 108


>AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42813 fis, clone BRCAN2012355. ).
          Length = 180

 Score = 31.9 bits (69), Expect = 6.2
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
 Frame = -3

Query: 665 FISLHKHIDKHTYTQAHTHTYIHVNIVL*LVFKY**IHFWLFT---LCVGL-VYISI 507
           ++ +H HI  H Y   +THTY+  +I +  V+ Y  I+ +++T   +CV + +Y+SI
Sbjct: 66  YVCVHIHICVHIYLCMYTHTYMCAHIHM-CVYTY--IYVYIYTHIHICVHINMYVSI 119


>AY437503-1|AAR92146.1|  108|Homo sapiens tumor differentiation
           factor protein.
          Length = 108

 Score = 31.5 bits (68), Expect = 8.2
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 641 DKHTYTQAHTHTYIHVNIV 585
           D HT+T  HTHT+ H N +
Sbjct: 24  DTHTHTHTHTHTHTHTNTI 42


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,752,094
Number of Sequences: 237096
Number of extensions: 3061612
Number of successful extensions: 6726
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6543
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22142890136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)