Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_H11_e376_15.seq
         (1433 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    30   0.048

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 29.9 bits (64), Expect = 0.048
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +2

Query: 341 CNFGVFTFELL*LLTCIVIEILYILIYFVCLFFFCNNF 454
           C F +FT  LL LL CI       LI  +C+++FC  F
Sbjct: 270 CAFIIFTMHLLFLL-CIYY-FYCALIILLCIYYFCRAF 305



 Score = 26.2 bits (55), Expect = 0.60
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +2

Query: 338 YCNFGVFTFELL*LLTCIVIEILYILIYFVCLFFFC 445
           YC F +FT  LL LL CI       +I+ + L F C
Sbjct: 150 YCAFIIFTVHLLFLL-CIYHFFCAFIIFTMHLLFCC 184


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,461
Number of Sequences: 336
Number of extensions: 1785
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 42711225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)