Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_H10_e368_16.seq
         (1455 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   7.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   9.9  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   9.9  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +2

Query: 677 PTEEAKAFAEQNGLSFIETSALDSTNVEPAFQ 772
           PT  A AF+EQ G   I      S  V   FQ
Sbjct: 10  PTSSAPAFSEQRG-GVISEGVASSLQVVALFQ 40


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -1

Query: 465 IWAFIVLPSTSILLVANSTPIVDFDSKLNSFLVK 364
           I   + L STSILL+ N+  +   + ++ + L+K
Sbjct: 80  IITIVTLTSTSILLIVNAVFVK--EKRIRTLLIK 111


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 9/26 (34%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
 Frame = -2

Query: 161 TLH--NFLNNITYYRFIRFSQVPFII 90
           TLH  N+++++ ++RF +    PF+I
Sbjct: 212 TLHFVNYIDDLFFFRFEKSKFEPFLI 237


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 260,751
Number of Sequences: 336
Number of extensions: 4884
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 43428200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)