Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_H10_e368_16.seq
(1455 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 295 7e-81
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 184 3e-47
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 182 8e-47
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 159 1e-39
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 144 2e-35
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 139 1e-33
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 128 2e-30
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 116 6e-27
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 96 1e-20
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 93 9e-20
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 93 1e-19
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 86 1e-17
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 82 2e-16
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 76 1e-14
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 72 2e-13
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 71 4e-13
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 68 4e-12
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 63 8e-11
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 52 2e-07
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 49 2e-06
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 46 1e-05
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 45 3e-05
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 29 2.1
SPAC22A12.11 |dak1||dihydroxyacetone kinase Dak1|Schizosaccharom... 28 2.8
SPBC354.01 |gtp1|SPBC649.06|GTP binding protein Gtp1|Schizosacch... 27 6.5
SPBC17G9.03c |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr... 27 8.6
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 8.6
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 295 bits (725), Expect = 7e-81
Identities = 143/203 (70%), Positives = 170/203 (83%), Gaps = 1/203 (0%)
Frame = +2
Query: 284 REDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQ 463
+EDEYDYLFK VLIGDSGVGKS+LL RFTRNEFN+ESKSTIGVEFATR+I +D K IKAQ
Sbjct: 3 QEDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQ 62
Query: 464 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVG 643
IWDTAGQERYRAITSAYYRGAVGAL+VYDI K S++NV RWL+ELR+HAD NI+IMLVG
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVG 122
Query: 644 NKSDLRHLRSIPTEEAKAFAEQNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRD 823
NK+DL HLR++ TEEA+AFA +N LSFIETSA+D++NVE AFQ +LTEI+RIVS R +
Sbjct: 123 NKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEA 182
Query: 824 PXEGDVIRPDA-EPAXVRPSXAD 889
+G + P A + + P+ D
Sbjct: 183 GDDG--VHPTAGQTLNIAPTMND 203
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 184 bits (448), Expect = 3e-47
Identities = 88/166 (53%), Positives = 119/166 (71%)
Frame = +2
Query: 293 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 472
EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+ E++GKT+K QIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWD 63
Query: 473 TAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKS 652
TAGQER+R ITS+YYRGA G ++VYD+ S+ NV++WL+E+ +A + + +LVGNKS
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKS 123
Query: 653 DLRHLRSIPTEEAKAFAEQNGLSFIETSALDSTNVEPAFQNILTEI 790
D+ + + AK FA+ + F+ETSA DSTNVE AF + +I
Sbjct: 124 DMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQI 169
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 182 bits (444), Expect = 8e-47
Identities = 83/165 (50%), Positives = 114/165 (69%)
Frame = +2
Query: 296 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 475
YDYL K++LIGDSGVGKS LL RF+ + F +TIG++F R+IE+DGK IK QIWDT
Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65
Query: 476 AGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSD 655
AGQER+R IT+AYYRGA+G LL+YD+ S++NV W + HA +N+ +L+GNK D
Sbjct: 66 AGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCD 125
Query: 656 LRHLRSIPTEEAKAFAEQNGLSFIETSALDSTNVEPAFQNILTEI 790
R + E+ +A A++ G+ F+E SA + NV+ AF + EI
Sbjct: 126 CEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 159 bits (385), Expect = 1e-39
Identities = 77/173 (44%), Positives = 113/173 (65%), Gaps = 5/173 (2%)
Frame = +2
Query: 287 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV----DGKTI 454
++ YDYL K+VL G SG GKS LL RF +N+++ + T+G++FA+R I V K I
Sbjct: 3 KESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRI 62
Query: 455 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIM 634
K QIWDTAGQE++R++ YYRGA GA+LVYD+ S+E + WL ++R A I ++
Sbjct: 63 KLQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVV 122
Query: 635 LVGNKSDLRHLRSIPTEEAKAFAEQNGLSFI-ETSALDSTNVEPAFQNILTEI 790
L G+KSDL++ R + TEEA F + +S ETS+ +NVE F ++++ I
Sbjct: 123 LAGSKSDLQNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTI 175
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 144 bits (350), Expect = 2e-35
Identities = 80/196 (40%), Positives = 119/196 (60%), Gaps = 2/196 (1%)
Frame = +2
Query: 311 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT-IKAQIWDTAGQE 487
K+VL+GDS VGKSSL+ RF +++F+ +STIG F T+++ +D T +K +IWDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 488 RYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDL-RH 664
RY+++ YYR A A++VYDI + S E + W++EL+ A + I+I L GNK DL +
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQE 135
Query: 665 LRSIPTEEAKAFAEQNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPXEGDVI 844
R++ +A+A+A + L F ETSA + NV F I ++ Q R V
Sbjct: 136 RRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKLPLEDKLNQARGAVNRGVN 195
Query: 845 RPDAEPAXVRPSXADS 892
+A PA +PS + S
Sbjct: 196 LSEARPA-AQPSGSCS 210
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 139 bits (336), Expect = 1e-33
Identities = 60/157 (38%), Positives = 108/157 (68%)
Frame = +2
Query: 308 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 487
FK+V +G+ VGK+SL++RF ++F+ ++TIG++F ++++ ++ +T++ Q+WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 488 RYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHL 667
R+R++ +Y R + A++VYDI H S+ N E+W+ ++R +++I+LVGNK+DL
Sbjct: 72 RFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADK 131
Query: 668 RSIPTEEAKAFAEQNGLSFIETSALDSTNVEPAFQNI 778
R + EE + A++ + +ETSA NV+ F+ I
Sbjct: 132 RQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKI 168
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 128 bits (309), Expect = 2e-30
Identities = 61/165 (36%), Positives = 105/165 (63%), Gaps = 6/165 (3%)
Frame = +2
Query: 302 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAG 481
+L KV+++G+SGVGK+S+++++ +F+ + K+TIG +F T+ + VD K + Q+WDTAG
Sbjct: 7 HLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAG 66
Query: 482 QERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHAD----QNILIMLVGNK 649
QER++++ A+YRGA +LVYD+ S+E ++ W E A + +L+GNK
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNK 126
Query: 650 SDL-RHLRSIPTEEAKAFAEQNG-LSFIETSALDSTNVEPAFQNI 778
D+ R + +A AF + G + + ETSA ++ NV+ AF+ +
Sbjct: 127 VDVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETV 171
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 116 bits (280), Expect = 6e-27
Identities = 60/163 (36%), Positives = 102/163 (62%), Gaps = 7/163 (4%)
Frame = +2
Query: 311 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 490
KVV++GDSGVGK+ L+++F +F+ E K+TIG +F T+ + VD K + Q+WDTAGQER
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 491 YRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQN---ILIMLVGNKSDL- 658
++++ A+YRGA ++VY++ S+++VE W +E Q+ ++VGN+ D
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKD 129
Query: 659 RHLRSIPTEEAKAFAE-QNGLSFI--ETSALDSTNVEPAFQNI 778
R++ A + + ++G + I E SA ++TNV F+ +
Sbjct: 130 ASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETV 172
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 95.9 bits (228), Expect = 1e-20
Identities = 55/164 (33%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Frame = +2
Query: 308 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 487
+K+V++GD GVGKS+L + ++ F E TI + + E+DG+ + DTAGQE
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLDVLDTAGQE 67
Query: 488 RYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNIL-IMLVGNKSDLRH 664
Y A+ Y R G LLVY+I S++ + + +++ D++ ++LV NK DL
Sbjct: 68 EYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEA 127
Query: 665 LRSIPTEEAKAFAEQNGLSFIETSALDSTNVEPAFQNILTEIYR 796
R + E + A+ ++ETSA NVE AF +++ I R
Sbjct: 128 ERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTIRR 171
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 93.1 bits (221), Expect = 9e-20
Identities = 56/161 (34%), Positives = 89/161 (55%), Gaps = 1/161 (0%)
Frame = +2
Query: 311 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 490
++ ++G VGKSSL ++ N F TI F+ ++I+ G+ +I DTAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQEFATEIIDTAGQDE 66
Query: 491 YRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQN-ILIMLVGNKSDLRHL 667
Y + S + G G +LVY I S+E V+ ++ +H + I++VGNKSDL
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQ 126
Query: 668 RSIPTEEAKAFAEQNGLSFIETSALDSTNVEPAFQNILTEI 790
R++ EE KA A + ++ E SA + NV AF+ I++EI
Sbjct: 127 RAVTAEEGKALANEWKCAWTEASARHNENVARAFELIISEI 167
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 92.7 bits (220), Expect = 1e-19
Identities = 50/154 (32%), Positives = 81/154 (52%)
Frame = +2
Query: 308 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 487
FK+VL+GD G GK++ + R EF + +T+GVE + I +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 488 RYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHL 667
+ + YY ++++D+ ++Y+NV W R+L +NI I+L GNK D++
Sbjct: 70 KLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDL-VRVCENIPIVLCGNKVDVKE- 127
Query: 668 RSIPTEEAKAFAEQNGLSFIETSALDSTNVEPAF 769
R + +A F + L + + SA + N E F
Sbjct: 128 RKVKA-KAITFHRKKNLQYYDISAKSNYNFEKPF 160
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 86.2 bits (204), Expect = 1e-17
Identities = 47/168 (27%), Positives = 88/168 (52%), Gaps = 7/168 (4%)
Frame = +2
Query: 311 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 490
KV +IGDS +GK+SL+ + + F+ ES T+GV F ++I + I IWD GQ
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQRE 71
Query: 491 YRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLR 670
+ + AV L ++D+++ + +++ W R+ R ++ + +L+G K D H
Sbjct: 72 FVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGF-NKTAVPILIGTKYD--HFM 128
Query: 671 SIP-------TEEAKAFAEQNGLSFIETSALDSTNVEPAFQNILTEIY 793
+ P T++A+ +A+ S + S S NV+ F+ +L +++
Sbjct: 129 TFPREDQEEITKQARRYAKAMKASLVFCSTSHSINVQKIFKIVLAKVF 176
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 81.8 bits (193), Expect = 2e-16
Identities = 62/185 (33%), Positives = 92/185 (49%), Gaps = 10/185 (5%)
Frame = +2
Query: 311 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 490
K+V++GD GK+SLL+ FT+ F + TI E I VDG +I+ +WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTI-FENYIHDIFVDGNSIELSLWDTAGQEE 73
Query: 491 YRAITSAYYRGAVGALLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLR-- 661
Y + S Y ++ + + S ENV +WL E+ + + ++LV K DLR
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNC-PGVKLVLVALKCDLRGA 132
Query: 662 ------HLRSIPTEEAKAFAEQ-NGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMR 820
H + I EE A A++ N + ++E SA + V AF TE R+ Q R
Sbjct: 133 DEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAF----TEAARVALAAQPR 188
Query: 821 DPXEG 835
+G
Sbjct: 189 GTKDG 193
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 75.8 bits (178), Expect = 1e-14
Identities = 45/118 (38%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Frame = +2
Query: 311 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 490
K+V++GD GK+SLLS FT F E T+ + + VDGK+++ +WDTAGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVS-DCRVDGKSVQLALWDTAGQEE 68
Query: 491 YRAITSAYYRGAVGALLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLR 661
Y + Y A L+ + I S ENV +W+ E+ N+ +LVG K+DLR
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLC-PNVPFILVGMKADLR 125
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 72.1 bits (169), Expect = 2e-13
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Frame = +2
Query: 311 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 490
K+V++GD GK+ LL F++ F T+ + +EVDG+ I+ +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVA-DVEVDGRHIELALWDTAGQED 66
Query: 491 YRAITSAYYRGAVGALLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLRH 664
Y + Y + L+ + + S +NV E+W+ E+ H N+ I+LVG K DLR+
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVL-HFCSNLPILLVGCKVDLRN 124
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 70.9 bits (166), Expect = 4e-13
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Frame = +2
Query: 311 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 490
K+V++GD GK+ LL F++ F T+ + +EVDG+ ++ +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVA-DVEVDGRHVELALWDTAGQED 66
Query: 491 YRAITSAYYRGAVGALLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLR-- 661
Y + Y + L+ + + S +NV E+W+ E+ H ++ I+LV K+DLR
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVL-HFCSSLPILLVACKADLRND 125
Query: 662 ----------HLRSIPTEEAKAFAEQNG-LSFIETSALDSTNVEPAFQN 775
+ + TEE +A A++ G ++E SA + V F++
Sbjct: 126 PKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFES 174
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 67.7 bits (158), Expect = 4e-12
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Frame = +2
Query: 311 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATR-SIEVDGKTIKAQIWDTAGQE 487
K+V++GD G GK+ LL F+ F T+ + T + + K I+ +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 488 RYRAITSAYYRGAVGALLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLRH 664
Y + Y + LL + I S NV E+W E++ H I+LVG K+DLR
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQ-HFCPRTPIVLVGLKADLRK 134
Query: 665 ------------LRSIPTEEAKAFAEQNGLSFIETSALDSTNVEPAFQ 772
L + ++A++ A ++E SA ++T V FQ
Sbjct: 135 DRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVFQ 182
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 63.3 bits (147), Expect = 8e-11
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Frame = +2
Query: 311 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 490
K V++GD VGK+ LL +T N+F + T+ +A ++ + + ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAV-TVMIGDEPYTLGLFDTAGQED 63
Query: 491 YRAITSAYYRGAVGALLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLR-- 661
Y + Y L+ + + S+ENV E+W E+ H + ++VG + DLR
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHC-PGVPCLIVGTQIDLRDD 122
Query: 662 ----------HLRSIPTEEAKAFAEQNG-LSFIETSALDSTNVEPAFQNIL 781
H + E+ + A + G + ++E SAL ++ F +
Sbjct: 123 PSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVFDEAI 173
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 52.4 bits (120), Expect = 2e-07
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Frame = +2
Query: 311 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 490
+++++G GK+++L + N+ ++ + T+G T V K IK +WD GQ++
Sbjct: 23 RILMLGLDAAGKTTILYKLKLNQ-SVVTIPTVGFNVET----VTYKNIKFNVWDVGGQDK 77
Query: 491 YRAITSAYYRGAVGALLVYDIAKHLSYENVERWL-RELRDHADQNILIMLVGNKSDL 658
R + Y+ G G + V D A + L R + D ++ L++++ NK DL
Sbjct: 78 IRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDL 134
Score = 29.5 bits (63), Expect = 1.2
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +2
Query: 698 FAEQNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRD 823
F GL F+ SA DS + A Q E++RI+S R+MRD
Sbjct: 86 FTGTKGLIFVVDSA-DSNRISEARQ----ELHRIISDREMRD 122
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 48.8 bits (111), Expect = 2e-06
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Frame = +2
Query: 311 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 490
+V+L+G GK+++L + N E T G F R++EV+G ++ IWD GQ+
Sbjct: 18 RVLLLGLDNAGKTTILKCLLNEDVN-EVSPTFG--FQIRTLEVEG--LRFTIWDIGGQKT 72
Query: 491 YRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNIL---IMLVGNKSDL 658
R Y+ + V D L E L+EL ++ +L I+++ NKSD+
Sbjct: 73 LRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELL--VEEKLLFTSILVLANKSDV 129
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 46.0 bits (104), Expect = 1e-05
Identities = 50/159 (31%), Positives = 70/159 (44%), Gaps = 6/159 (3%)
Frame = +2
Query: 311 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 490
+VV+ GD GVGKSSL+S + E N+ S + + S + + DT
Sbjct: 5 RVVICGDQGVGKSSLISALIQ-EDNVTSIPKVFPIISIPSNPDSNDDVSLVLVDTQSDSN 63
Query: 491 YRAITSAYYRGAVGALLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKS-DLRH 664
R +A + A LVY + + SYE V WL R N+ I+L NKS DL +
Sbjct: 64 EREYLAAEIKKANVICLVY--SDNYSYERVSIFWLPYFRS-LGVNVPIVLCENKSEDLDN 120
Query: 665 LRSIPTEEAKAFAEQNGLSFIET----SALDSTNVEPAF 769
+ + T E + N IE SAL+ NV F
Sbjct: 121 YQGLHTIEHEMIPLINEFKEIEACILCSALEKINVNELF 159
Score = 29.5 bits (63), Expect = 1.2
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 5/161 (3%)
Frame = +2
Query: 293 EYDY-LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 469
+YD +F ++G GK++LLS F N N + +T+ S+E T + +
Sbjct: 416 KYDRNVFLCFVVGSKSCGKTALLSSFINNNTNRLTPNTV-----VNSVEFQ-STQRYLVL 469
Query: 470 DTAGQERYRAITSAYYRGAVGAL-LVYDIAKHLSYENVERWLRELRDHADQNILIMLVGN 646
G+ + A L L+YD + S+ + L D Q I +
Sbjct: 470 SEIGETDLDILAEPKSLEACDILCLLYDSSNPNSFSFIANLLNLYPDL--QKIPCVFAAT 527
Query: 647 KSDLRHLRSIPTEEAKAFAEQNGL---SFIETSALDSTNVE 760
K+DL + + F +Q GL + I T+A+ +T+ E
Sbjct: 528 KADLDRQQQRYPVQPDEFTKQLGLPSPTHISTAAIWNTSKE 568
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 44.8 bits (101), Expect = 3e-05
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Frame = +2
Query: 311 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 490
+++++G GK+++L + E + + TIG T V+ + I +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVET----VEYRNISFTVWDVGGQDK 73
Query: 491 YRAITSAYYRGAVGALLVYDI-AKHLSYENVERWLRELRDHADQNILIMLVGNKSDL 658
R + Y++ G + V D + E E R L + ++ L+++ NK DL
Sbjct: 74 IRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLLVFANKQDL 130
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 314 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDG 445
VV+ G SGVGKS+LL R ++ + S R+ E DG
Sbjct: 21 VVVFGPSGVGKSTLLKRLLKDHGDKLGFSVSHTTRTPRAGEKDG 64
>SPAC22A12.11 |dak1||dihydroxyacetone kinase
Dak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -3
Query: 589 PSLDVFIRQMLRYVVD*KRSDRTAVVSRRDRPIPLLARGVPYLGFYSFT 443
PS+D I QML+ ++D DR V D + LL + L F+
Sbjct: 233 PSIDDLIAQMLKQMLDQSDKDRAYVKIEGDDEVVLLMNNLGGLSMLEFS 281
>SPBC354.01 |gtp1|SPBC649.06|GTP binding protein
Gtp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 27.1 bits (57), Expect = 6.5
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +2
Query: 272 KMGTREDEYDYL----FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV 439
K G + + +D L +V IG VGKS+LLS T+ + S + +E
Sbjct: 47 KSGPKGEGFDVLKSGDARVAFIGFPSVGKSTLLSAITKTKSATASYEFTTLTAIPGVLEY 106
Query: 440 DGKTIK 457
DG I+
Sbjct: 107 DGAEIQ 112
>SPBC17G9.03c |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 591
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 608 GHVTHATISRRFHKTDASLCRRLEA 534
GH + ++H++DA LC R EA
Sbjct: 468 GHPQMMSPLAKYHRSDAGLCERFEA 492
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/45 (26%), Positives = 14/45 (31%)
Frame = +2
Query: 848 PDAEPAXVRPSXADSVRXXXXXXPXPPPPXXSPLXLXPXXKXPXG 982
P P P+ V P PPP +P P P G
Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,415,141
Number of Sequences: 5004
Number of extensions: 76374
Number of successful extensions: 270
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 253
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 812755802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -