Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_H10_e368_16.seq
         (1455 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.           158   4e-40
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    70   1e-13
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    38   7e-04
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    27   1.8  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score =  158 bits (383), Expect = 4e-40
 Identities = 75/161 (46%), Positives = 108/161 (67%)
 Frame = +2

Query: 308 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 487
           FK+VL+G+S VGKSSL+ RF + +F+   +STIG  F T+++ +D  T+K +IWDTAGQE
Sbjct: 25  FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQE 84

Query: 488 RYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHL 667
           RY ++   YYRGA  A++VYDI    S+   + W++EL+  A  NI+I L GNK+DL + 
Sbjct: 85  RYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADLANS 144

Query: 668 RSIPTEEAKAFAEQNGLSFIETSALDSTNVEPAFQNILTEI 790
           R +  EEAK +A+ N L F+ETSA  + NV   F  I  ++
Sbjct: 145 RVVDYEEAKQYADDNRLLFMETSAKTAVNVNDIFLAIAKKL 185


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 70.1 bits (164), Expect = 1e-13
 Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
 Frame = +2

Query: 311 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 490
           K V++GD  VGK+ +L  +T + F  E   T    ++   + VDG  +   +WDTAGQE 
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMV-VDGVQVSLGLWDTAGQED 66

Query: 491 YRAITSAYYRGAVGALLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLRHL 667
           Y  +    Y      L+ Y +A   S+ENV  +W  E++ H   +  I+LVG K DLR  
Sbjct: 67  YDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHC-PDAPIILVGTKIDLRED 125

Query: 668 R 670
           R
Sbjct: 126 R 126


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 37.9 bits (84), Expect = 7e-04
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +2

Query: 473 TAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNK 649
           +AGQE Y  +    Y      L+ + +    S+ENV E+W+ E+  H  Q    +LVG +
Sbjct: 1   SAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-QKTPFLLVGTQ 59

Query: 650 SDLRHLRSIPTEEAK 694
            DLR   S   + AK
Sbjct: 60  IDLRDENSTLEKLAK 74


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 26.6 bits (56), Expect = 1.8
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -1

Query: 456 FIVLPSTSILLVANSTPIVDFDSKLNSFLVKRERRLL 346
           F +L    +L++  + P+V FD  LN F +  +   L
Sbjct: 493 FHLLAGQPLLIIGTTGPLVLFDEALNQFCISNDFNFL 529


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,164,524
Number of Sequences: 2352
Number of extensions: 19226
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 169466715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)