Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_H09_e360_15.seq
         (1466 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    23   4.3  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    23   7.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   7.5  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   7.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   7.5  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   10.0 

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 779 QYIRNALITNKRNFMRSLRFPLVFVIIAG 693
           QY++NA + +K  F    R PL   ++AG
Sbjct: 44  QYLQNAALYHKLQFRGPPRTPLQPKLVAG 72


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +2

Query: 320 VLDILNEMAQENYVYHVDSVLSNDKLYGSDEE 415
           VLDI+N M  + +         N  LYG   E
Sbjct: 193 VLDIINVMTYDFHAMWAGFTAENSPLYGGVNE 224


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +2

Query: 605 LSQKLLKDSSHNNITKATLSALQNDDRPTSQRLLQKLKESVKNA*NYVY 751
           LS K++ + + NN+T      L N+D P +++    +K+SV     Y +
Sbjct: 17  LSYKVMYNGN-NNVTDLVEYVLLNEDNPCARKC---VKDSVPMTCRYTF 61


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
 Frame = +2

Query: 494 KETQKQYNLSMELFWRVIRRGDLGQESVHNLAVN-LWILSQKLLKDSSHN--NITKATLS 664
           K + KQY   ++L+W   +R   G   +     N L  LS +  + +S+N  N  ++ L+
Sbjct: 47  KGSLKQYTCELKLWWEFCQRN--GHNCLDFTVQNILTFLSCRFHQGASYNTLNTCRSALA 104

Query: 665 ALQNDDRPTSQRLLQKLK 718
            L + +     R+ + L+
Sbjct: 105 LLLSPEVGKDHRIKRFLR 122


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 9/35 (25%), Positives = 14/35 (40%)
 Frame = +3

Query: 180 GLAQQLHWXXXXXXXXXXXXXXXDLSKLWNEYIGT 284
           GL  + +W               DLS  W+E +G+
Sbjct: 13  GLQLECNWSSGPNATLQSSACTDDLSSCWSEDMGS 47


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 353 NYVYHVDSVLSNDKLYGSDEEFIDAI 430
           N +YH ++  + +     DEE +DAI
Sbjct: 221 NTIYHQENFENYEPKSPEDEELLDAI 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 264,606
Number of Sequences: 336
Number of extensions: 5104
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 43837900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)