Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_H08_e352_16.seq
         (1512 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    27   0.27 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    25   1.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   5.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   7.8  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   7.8  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 27.5 bits (58), Expect = 0.27
 Identities = 19/69 (27%), Positives = 28/69 (40%)
 Frame = +3

Query: 117 GPLSHTVVRDRRPPIHSNGRRPSAHAQTDAAPRFTPTGRRPPVHSSTGGVPYYTTNVSVY 296
           GPL  +V   +R    S  + P+   +TD  P+  P    P        +PY+   V+  
Sbjct: 240 GPLDLSVSSRKRSNDDSVSQPPNRKPRTDFKPQVLPQWPSP---IGASHLPYFAAAVAAA 296

Query: 297 RGPLPNTNS 323
               P TNS
Sbjct: 297 SNLSPKTNS 305


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +1

Query: 373 LNNTYYILFQKPLSFFVSK--WLECYFCTVLRGLCAL 477
           LNN Y+I+FQ   SF++ K   LE  +  +  GL  L
Sbjct: 294 LNNFYFIIFQVFESFYLHKATTLETVYYFISLGLLIL 330


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +2

Query: 89   THTLRTTRARPLVTYRGSRPPPPN 160
            T T RTT  RP  T   +RP   N
Sbjct: 1055 TTTRRTTTTRPTTTSTTTRPTTTN 1078


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 8/32 (25%), Positives = 11/32 (34%)
 Frame = +1

Query: 43  WXPPGCRXFGTRLPPHTHATNDACAAPCHIPW 138
           W P  C+     +P  T         P + PW
Sbjct: 493 WVPHSCKLTSKEVPGETINLQTCVRCPNNYPW 524


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 883 QRTCCSXSLHFLICYY 836
           Q+TC + S+++ IC Y
Sbjct: 37  QKTCLNLSINYCICGY 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 260,257
Number of Sequences: 336
Number of extensions: 5432
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45374275
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)