Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_H08_e352_16.seq
         (1512 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          25   7.6  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          25   7.6  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          25   7.6  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          25   7.6  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          24   10.0 
AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    24   10.0 
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   10.0 

>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 7.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 361 YFFLLNNTYYILFQKPLSFFVSKW 432
           Y FL+NN  YI+     + FV+ W
Sbjct: 6   YRFLVNNGCYIVLSTEWTSFVNPW 29


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 7.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 361 YFFLLNNTYYILFQKPLSFFVSKW 432
           Y FL+NN  YI+     + FV+ W
Sbjct: 6   YRFLVNNGCYIVLSTEWTSFVNPW 29


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 7.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 361 YFFLLNNTYYILFQKPLSFFVSKW 432
           Y FL+NN  YI+     + FV+ W
Sbjct: 6   YRFLVNNGCYIVLSTEWTSFVNPW 29


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 7.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 361 YFFLLNNTYYILFQKPLSFFVSKW 432
           Y FL+NN  YI+     + FV+ W
Sbjct: 6   YRFLVNNGCYIVLSTEWTSFVNPW 29


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 24.2 bits (50), Expect = 10.0
 Identities = 17/66 (25%), Positives = 26/66 (39%)
 Frame = +1

Query: 70  GTRLPPHTHATNDACAAPCHIPWFETAAPQYTPTGGAPQLTLKQTPLLGSLQRAGAPQFT 249
           G ++P +T   +       +IP  ET  P Y    G P   L Q   +  L R    +  
Sbjct: 245 GQQIPTNTTIMDSVSVGVPNIPNTETPPPGYMSEDGDP---LDQNDNMTDLSRMSPSEMD 301

Query: 250 LQRVVF 267
            Q V++
Sbjct: 302 TQPVMY 307


>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 24.2 bits (50), Expect = 10.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 337 PCAAVFYCYFFLLNNTYYILFQKPLS 414
           PC+ V +   +L+N TY +   K +S
Sbjct: 94  PCSLVQWLKSYLINRTYIVKIDKHMS 119


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 24.2 bits (50), Expect = 10.0
 Identities = 15/42 (35%), Positives = 16/42 (38%)
 Frame = +2

Query: 53   RAAGNSARGSPLTHTLRTTRARPLVTYRGSRPPPPNTLQRAA 178
            RA    AR      + R  RAR     R  RPP P    R A
Sbjct: 1037 RAEIRRARNDRRNASRRAARARQRELQRAGRPPSPPPSPRTA 1078


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,129,588
Number of Sequences: 2352
Number of extensions: 21088
Number of successful extensions: 82
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 177188220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)