Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_H08_e352_16.seq
(1512 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY358214-1|AAQ88581.1| 389|Homo sapiens GPR113 protein. 33 3.6
AY358172-1|AAQ88539.1| 873|Homo sapiens GPR113 protein. 33 3.6
AY255611-1|AAO85123.1| 146|Homo sapiens G protein-coupled recep... 33 3.6
AY140955-1|AAN46669.1| 1079|Homo sapiens G-protein coupled recep... 33 3.6
AC010896-3|AAY14645.1| 1079|Homo sapiens unknown protein. 33 3.6
AB083619-1|BAB89332.1| 517|Homo sapiens putative G-protein coup... 33 3.6
AB065959-1|BAC45265.1| 990|Homo sapiens seven transmembrane hel... 33 3.6
Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein. 32 4.8
X56957-1|CAA40278.1| 634|Homo sapiens ankyrin (brank-1) protein. 32 4.8
>AY358214-1|AAQ88581.1| 389|Homo sapiens GPR113 protein.
Length = 389
Score = 32.7 bits (71), Expect = 3.6
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 250 LQRVVFPITQQTFPFIGAPFQIPTQYSKRPCAAVFYCYFFLLNNTYYILFQ 402
L +VF + F+GAPF P S AA F C+F L +++L Q
Sbjct: 129 LLNMVFCLLAADTCFLGAPFLSPGPRSPLCLAAAFLCHFLYLATFFWMLAQ 179
>AY358172-1|AAQ88539.1| 873|Homo sapiens GPR113 protein.
Length = 873
Score = 32.7 bits (71), Expect = 3.6
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 250 LQRVVFPITQQTFPFIGAPFQIPTQYSKRPCAAVFYCYFFLLNNTYYILFQ 402
L +VF + F+GAPF P S AA F C+F L +++L Q
Sbjct: 613 LLNMVFCLLAADTCFLGAPFLSPGPRSPLCLAAAFLCHFLYLATFFWMLAQ 663
>AY255611-1|AAO85123.1| 146|Homo sapiens G protein-coupled receptor
PGR23 protein.
Length = 146
Score = 32.7 bits (71), Expect = 3.6
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 250 LQRVVFPITQQTFPFIGAPFQIPTQYSKRPCAAVFYCYFFLLNNTYYILFQ 402
L +VF + F+GAPF P S AA F C+F L +++L Q
Sbjct: 16 LLNMVFCLLAADTCFLGAPFLSPGPRSPLCLAAAFLCHFLYLATFFWMLAQ 66
>AY140955-1|AAN46669.1| 1079|Homo sapiens G-protein coupled receptor
GPR113 protein.
Length = 1079
Score = 32.7 bits (71), Expect = 3.6
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 250 LQRVVFPITQQTFPFIGAPFQIPTQYSKRPCAAVFYCYFFLLNNTYYILFQ 402
L +VF + F+GAPF P S AA F C+F L +++L Q
Sbjct: 812 LLNMVFCLLAADTCFLGAPFLSPGPRSPLCLAAAFLCHFLYLATFFWMLAQ 862
>AC010896-3|AAY14645.1| 1079|Homo sapiens unknown protein.
Length = 1079
Score = 32.7 bits (71), Expect = 3.6
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 250 LQRVVFPITQQTFPFIGAPFQIPTQYSKRPCAAVFYCYFFLLNNTYYILFQ 402
L +VF + F+GAPF P S AA F C+F L +++L Q
Sbjct: 812 LLNMVFCLLAADTCFLGAPFLSPGPRSPLCLAAAFLCHFLYLATFFWMLAQ 862
>AB083619-1|BAB89332.1| 517|Homo sapiens putative G-protein coupled
receptor protein.
Length = 517
Score = 32.7 bits (71), Expect = 3.6
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 250 LQRVVFPITQQTFPFIGAPFQIPTQYSKRPCAAVFYCYFFLLNNTYYILFQ 402
L +VF + F+GAPF P S AA F C+F L +++L Q
Sbjct: 250 LLNMVFCLLAADTCFLGAPFLSPGPRSPLCLAAAFLCHFLYLATFFWMLAQ 300
>AB065959-1|BAC45265.1| 990|Homo sapiens seven transmembrane helix
receptor protein.
Length = 990
Score = 32.7 bits (71), Expect = 3.6
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 250 LQRVVFPITQQTFPFIGAPFQIPTQYSKRPCAAVFYCYFFLLNNTYYILFQ 402
L +VF + F+GAPF P S AA F C+F L +++L Q
Sbjct: 694 LLNMVFCLLAADTCFLGAPFLSPGPRSPLCLAAAFLCHFLYLATFFWMLAQ 744
>Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein.
Length = 3925
Score = 32.3 bits (70), Expect = 4.8
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +3
Query: 48 SPGLQXIRHEAPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRR----PSAHAQTDAAPR 215
SP + RH +P S T+ ER P+S + D+RPP+ +GR P + +T+
Sbjct: 1882 SPSTKTERH-SPVSSTKTERHP--PVSPSGKTDKRPPVSPSGRTEKHPPVSPGRTEKRLP 1938
Query: 216 FTPTGR 233
+P+GR
Sbjct: 1939 VSPSGR 1944
>X56957-1|CAA40278.1| 634|Homo sapiens ankyrin (brank-1) protein.
Length = 634
Score = 32.3 bits (70), Expect = 4.8
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +3
Query: 48 SPGLQXIRHEAPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRR----PSAHAQTDAAPR 215
SP + RH +P S T+ ER P+S + D+RPP+ +GR P + +T+
Sbjct: 406 SPSTKTERH-SPVSSTKTERHP--PVSPSGKTDKRPPVSPSGRTEKHPPVSPGRTEKRLP 462
Query: 216 FTPTGR 233
+P+GR
Sbjct: 463 VSPSGR 468
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,072,056
Number of Sequences: 237096
Number of extensions: 3592692
Number of successful extensions: 12082
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12068
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22471744940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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