Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_H07_e344_15.seq
         (1463 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...   280   6e-77
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         27   1.0  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    26   2.4  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       25   4.2  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   7.3  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   7.3  

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score =  280 bits (687), Expect = 6e-77
 Identities = 126/156 (80%), Positives = 142/156 (91%)
 Frame = +2

Query: 128 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 307
           MGRVIRAQRKGAGSVF +HTKKRKG PKLR LDYAERHGY+KGVVK II DPGRGAPLAV
Sbjct: 1   MGRVIRAQRKGAGSVFRAHTKKRKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAV 60

Query: 308 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 487
           V+FRDPY+F+  K+LFIA EG+YTGQFVYCG++A L++GNV+P+G MPEGTIVCNLEEK 
Sbjct: 61  VNFRDPYRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKT 120

Query: 488 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 595
           GDRG+LAR SGN+A+VI HNPD KRTRVKLPSGAKK
Sbjct: 121 GDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKK 156



 Score =  197 bits (480), Expect = 8e-52
 Identities = 91/102 (89%), Positives = 93/102 (91%)
 Frame = +3

Query: 591 KKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 770
           KKVLPS+NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWP VRGVAMNPVEHPHGGG
Sbjct: 155 KKVLPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGG 214

Query: 771 NHQHIGKASTVKRGTSAGRKVGLIAARXTGXIRGGKTDPRKK 896
           NHQHIGKASTVKRGT  GRKVGLIAAR TG IRGGK D + K
Sbjct: 215 NHQHIGKASTVKRGTPPGRKVGLIAARRTGRIRGGKGDEKFK 256


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 27.5 bits (58), Expect = 1.0
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 606 SSNRGMVGIVAGGGRIDKPILKAGRAYHK 692
           S+ +  +G V GG   D  IL  GRAYH+
Sbjct: 81  SAGQVPLGAVVGGHTSDGEILYVGRAYHE 109


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 26.2 bits (55), Expect = 2.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 394 LWQESNSRSWQCNACGCY 447
           LW+ +N     CNACG Y
Sbjct: 187 LWRRNNDGEPVCNACGLY 204



 Score = 25.8 bits (54), Expect = 3.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 394 LWQESNSRSWQCNACGCY 447
           LW+   +  + CNACG Y
Sbjct: 130 LWRRDGTGHYLCNACGLY 147


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 25.4 bits (53), Expect = 4.2
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -3

Query: 696 CICDKHAQPSRWACQYDHHPRQYQPCLCCL 607
           CI ++ +   R  C  DH     + C+CC+
Sbjct: 296 CIIEERSNIDRGECLKDHCAYGGKTCVCCI 325


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 7.3
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 236 RHGYIKGVVKDIIHDP 283
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 7.3
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 236 RHGYIKGVVKDIIHDP 283
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,208,021
Number of Sequences: 2352
Number of extensions: 26581
Number of successful extensions: 34
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 170685900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)