Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_H03_e312_15.seq
         (1528 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    27   1.1  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    27   1.9  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    27   1.9  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          25   7.6  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   7.6  

>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 27.5 bits (58), Expect = 1.1
 Identities = 28/145 (19%), Positives = 64/145 (44%)
 Frame = +1

Query: 463 LKETSRRLQALSKRLGACVEKSRPYYDAVGVAANARSECQRAAVQFQRASELHAAAKETV 642
           ++E   RL+AL  +L +   ++R  +        AR    +A ++++    L++A  + +
Sbjct: 194 VRELEARLEALEAQLQSM--RAREEFQQQIHVCMAR----KAWLEYEELFLLYSATLKDL 247

Query: 643 TLAEQRFVSKQDEWQFDNNWQEVLNHAIIKXMDAEKRKAESGREHQKKATAYIAAEKKVT 822
            LA++    K+ ++   N +++ +   + +  + E  KA+     Q+      + E+K  
Sbjct: 248 KLAKKCTEEKEQQY---NQFKQEMEAILARKKELETSKAKQVAIGQRSTDEINSLEEKTE 304

Query: 823 TLEDDLKRSIXNRASTSXKEALRRT 897
            LED + +          K   R+T
Sbjct: 305 RLEDTISKQKRELMDALAKADERKT 329


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 26.6 bits (56), Expect = 1.9
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 367 IQVELEKLNAATDEINKLELELDESMKTFHLLL 465
           IQ   EKL + T E+N+ + EL++++K    LL
Sbjct: 749 IQHATEKLQSLTQELNQSDEELEQAIKNQRNLL 781


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 26.6 bits (56), Expect = 1.9
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 367 IQVELEKLNAATDEINKLELELDESMKTFHLLL 465
           IQ   EKL + T E+N+ + EL++++K    LL
Sbjct: 749 IQHATEKLQSLTQELNQSDEELEQAIKNQRNLL 781


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 24.6 bits (51), Expect = 7.6
 Identities = 12/52 (23%), Positives = 17/52 (32%)
 Frame = +2

Query: 950  KFPYSNRLSXRGIXXGSPETRGXPREGPXPVVXKPGXGXRXPPPTESKXXAP 1105
            + PY  R   R    G+    G P++ P   + K   G   P         P
Sbjct: 830  QIPYHAREDSRPFTYGNIPATGTPQQPPAATMLKMQSGLSSPSMVRKALGTP 881


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.6 bits (51), Expect = 7.6
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +1

Query: 712 LNHAIIKXMDAEKRKAESGREHQKKATAYIAAEK 813
           L+H +++ +D  K   E  ++H     ++IA EK
Sbjct: 628 LDHIVVETIDTAKACIEFLKQHDIGRASFIALEK 661


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,110,374
Number of Sequences: 2352
Number of extensions: 20126
Number of successful extensions: 47
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 179220195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)