Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_H03_e312_15.seq
(1528 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 27 0.43
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 27 0.43
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 27 0.43
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 27 0.43
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 27 0.43
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 27 0.43
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 27 0.43
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 27 0.43
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 24 4.0
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 24 4.0
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 9.2
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 23 9.2
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 23 9.2
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 27.1 bits (57), Expect = 0.43
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 731 RXWMLRKERQKAVENTKRKPRLISQLRK 814
R WM+++ER++ E K+K L +LR+
Sbjct: 40 REWMIQQEREREHERLKKKMILEYELRR 67
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 27.1 bits (57), Expect = 0.43
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 731 RXWMLRKERQKAVENTKRKPRLISQLRK 814
R WM+++ER++ E K+K L +LR+
Sbjct: 40 REWMIQQEREREHERLKKKMILEYELRR 67
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 27.1 bits (57), Expect = 0.43
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 731 RXWMLRKERQKAVENTKRKPRLISQLRK 814
R WM+++ER++ E K+K L +LR+
Sbjct: 40 REWMIQQEREREHERLKKKMILEYELRR 67
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 27.1 bits (57), Expect = 0.43
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 731 RXWMLRKERQKAVENTKRKPRLISQLRK 814
R WM+++ER++ E K+K L +LR+
Sbjct: 40 REWMIQQEREREHERLKKKMILEYELRR 67
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 27.1 bits (57), Expect = 0.43
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 731 RXWMLRKERQKAVENTKRKPRLISQLRK 814
R WM+++ER++ E K+K L +LR+
Sbjct: 40 REWMIQQEREREHERLKKKMILEYELRR 67
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 27.1 bits (57), Expect = 0.43
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 731 RXWMLRKERQKAVENTKRKPRLISQLRK 814
R WM+++ER++ E K+K L +LR+
Sbjct: 40 REWMIQQEREREHERLKKKMILEYELRR 67
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 27.1 bits (57), Expect = 0.43
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 731 RXWMLRKERQKAVENTKRKPRLISQLRK 814
R WM+++ER++ E K+K L +LR+
Sbjct: 40 REWMIQQEREREHERLKKKMILEYELRR 67
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 27.1 bits (57), Expect = 0.43
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 731 RXWMLRKERQKAVENTKRKPRLISQLRK 814
R WM+++ER++ E K+K L +LR+
Sbjct: 40 REWMIQQEREREHERLKKKMILEYELRR 67
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 23.8 bits (49), Expect = 4.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 414 IDFISGSVQFLQFDLNSRVELSITIVVS 331
I F+S V +L D +V LSI+I++S
Sbjct: 250 ISFLSVLVFYLPSDSGEKVSLSISILLS 277
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 23.8 bits (49), Expect = 4.0
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +2
Query: 332 LTTMVILSSTLEFRSNWR 385
LTTM++++ +E +NWR
Sbjct: 12 LTTMLMMAIAVELPNNWR 29
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.6 bits (46), Expect = 9.2
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +2
Query: 737 WMLRKERQKAVENTKRK 787
W++++ER++ E KRK
Sbjct: 43 WLVQQEREQEYEKLKRK 59
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 22.6 bits (46), Expect = 9.2
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 956 PYSNRLSXRGIXXGSPETRGXPREGPXPVV 1045
P RL +G GSP G PR G P++
Sbjct: 134 PQKYRLRHKG--DGSPGGNGGPRNGLLPLL 161
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 22.6 bits (46), Expect = 9.2
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 956 PYSNRLSXRGIXXGSPETRGXPREGPXPVV 1045
P RL +G GSP G PR G P++
Sbjct: 134 PQKYRLRHKG--DGSPGGNGGPRNGLLPLL 161
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 306,714
Number of Sequences: 438
Number of extensions: 6135
Number of successful extensions: 51
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 53472375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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