Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_H02_e304_16.seq
         (1512 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    26   0.84 
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    26   0.84 
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    24   3.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   4.5  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 25.8 bits (54), Expect = 0.84
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 395 STCTFFLLSGNLLSEYLDNLKIYVI 469
           S C FFL++G LL   +  + +Y+I
Sbjct: 345 SACGFFLINGTLLHTIVGAVTVYLI 369


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 25.8 bits (54), Expect = 0.84
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 395 STCTFFLLSGNLLSEYLDNLKIYVI 469
           S C FFL++G LL   +  + +Y+I
Sbjct: 170 SACGFFLINGTLLHTIVGAVTVYLI 194


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 257 FLDVYLYQFIIVLNYL*LCYFLSFLHRKAERL 352
           FL VY+   +I +  +  C+F+  +  K E L
Sbjct: 173 FLPVYVSYLLIFVQQIPFCFFVRVIRLKIEDL 204


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 448  QFENICHLTEWVW*R 492
            +F+ +C+ T W W R
Sbjct: 1822 EFKVVCYFTNWAWYR 1836



 Score = 22.6 bits (46), Expect = 7.8
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 451  FENICHLTEWVW*R 492
            F+ +C+ T W W R
Sbjct: 1398 FKIVCYFTNWAWYR 1411


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,724
Number of Sequences: 336
Number of extensions: 5599
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45374275
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)