Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_H01_e296_15.seq
         (1581 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    29   0.095
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    24   3.6  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    24   3.6  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    24   3.6  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    23   4.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   6.2  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   6.2  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 29.1 bits (62), Expect = 0.095
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 77  TRXPISYQPASKGQRNKSKIWRKWRQIICSLPETP 181
           T+  I+Y P +KG R   K   K +Q++   P++P
Sbjct: 187 TKLKINYNPFAKGFRENGKSSAKRKQLVSEHPDSP 221


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 103 RVQGTAKQIEDLEKMAADNMQLTRDAKMKVGQA 201
           R   T KQ+ +LEK    N  LTR  ++++  A
Sbjct: 257 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASA 289


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 103 RVQGTAKQIEDLEKMAADNMQLTRDAKMKVGQA 201
           R   T KQ+ +LEK    N  LTR  ++++  A
Sbjct: 46  RTNFTNKQLTELEKEFHFNKYLTRARRIEIASA 78


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 103 RVQGTAKQIEDLEKMAADNMQLTRDAKMKVGQA 201
           R   T KQ+ +LEK    N  LTR  ++++  A
Sbjct: 46  RTNFTNKQLTELEKEFHFNKYLTRARRIEIASA 78


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 3/24 (12%)
 Frame = -3

Query: 139 PNLRFVSLSLGRGLIT---YRLPR 77
           P++ F+S +LG+ LIT   Y LP+
Sbjct: 60  PSVHFISRTLGQDLITTGGYTLPK 83


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 779 DLNIFYNCLFFCKDQVSVNFKI 714
           ++  +YN L+FC+  V +N  I
Sbjct: 325 EIEKYYNILYFCRIMVYLNSAI 346


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +1

Query: 418 MKEYQDEHDHLKIEVENIKDILNQ 489
           +KE+   HDH+ +   N + +L++
Sbjct: 51  VKEFDSFHDHVSVSNTNTEPLLSE 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 257,073
Number of Sequences: 336
Number of extensions: 5020
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 47730050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)