Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_H01_e296_15.seq
         (1581 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...   124   7e-30
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    29   0.28 
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    25   6.0  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score =  124 bits (299), Expect = 7e-30
 Identities = 64/151 (42%), Positives = 92/151 (60%)
 Frame = +1

Query: 76   HEXADKLSTRVQGTAKQIEDLEKMAADNMQLTRDAKMKVGQANTDAREAEKQVSKGLEDL 255
            H  AD+L+ R+  T  ++E+ E     ++ LT +AK KVGQA  ++ EA+ QV K + ++
Sbjct: 1473 HHEADQLNGRLAKTDNRLEEREAQIRKDLNLTNEAKEKVGQAQLNSNEAKSQVDKAMREV 1532

Query: 256  KIIMDELQNLPTLDDAALDRLQDSLDTAEKALKTVDLDGKIKSLTEAKNDHQRWMKEYQD 435
             +IM EL NL  +D  +LD L+  L  AEK L+   L  ++ SL EAKN   + ++ YQ 
Sbjct: 1533 SLIMSELANLREIDVNSLDDLERRLSAAEKELEDAQLTKRLSSLVEAKNIQNQNIRSYQK 1592

Query: 436  EHDHLKIEVENIKDILNQLPDGCFKRVVLEP 528
            E   L++EV NI+ I N LP GCFKR  LEP
Sbjct: 1593 ELADLRLEVANIELIANSLPPGCFKRTHLEP 1623


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 29.5 bits (63), Expect = 0.28
 Identities = 20/70 (28%), Positives = 35/70 (50%)
 Frame = +1

Query: 280 NLPTLDDAALDRLQDSLDTAEKALKTVDLDGKIKSLTEAKNDHQRWMKEYQDEHDHLKIE 459
           N   LD A ++R+Q  L   E  L+  D+  ++  +   K  H+    + +++HD L  E
Sbjct: 670 NAVLLDVAEINRIQAMLQEKEAELR--DISAEVSKIE--KTAHR--FGQLKEQHDMLNYE 723

Query: 460 VENIKDILNQ 489
           + N+K  L Q
Sbjct: 724 LNNLKQRLAQ 733


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 25.0 bits (52), Expect = 6.0
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = +1

Query: 145 MAADNMQLTRDAKMKVGQANTDAREAEKQVSKGLEDLKIIMDELQNLPTLDDAALD 312
           +A D +       M +G A+    E   + + GLE ++ I+D L ++  L DA  D
Sbjct: 295 VAMDPLCCADTDSMAIGAASESLNEWADEEA-GLEAIQKILDSLDDIIALQDANCD 349


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,115,132
Number of Sequences: 2352
Number of extensions: 19770
Number of successful extensions: 44
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 68
effective length of database: 404,043
effective search space used: 185051694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)