Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_H01_e296_15.seq
         (1581 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    24   4.1  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    24   4.1  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    24   4.1  

>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 177 VSGKLHIICRHFLQ 136
           VSG LH++ RHF Q
Sbjct: 143 VSGALHLLFRHFSQ 156


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 145 MAADNMQLTRDAKMKVGQANTDAREAEKQVSKGLEDLKIIMDELQNL 285
           MA+  ++LT     + G  NTDAR   +  S   EDL+ + + L  +
Sbjct: 249 MASGELELTLRIH-RGGGTNTDARHLFRTASSTPEDLQDLEEPLTTI 294


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 177 VSGKLHIICRHFLQ 136
           VSG LH++ RHF Q
Sbjct: 111 VSGALHLLFRHFSQ 124


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 308,644
Number of Sequences: 438
Number of extensions: 6320
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 55625625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)