Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_H01_e296_15.seq
(1581 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g27170.1 68415.m06029 structural maintenance of chromosomes (... 38 0.024
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 37 0.042
At4g02710.1 68417.m00366 kinase interacting family protein simil... 35 0.13
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 34 0.30
At3g02930.1 68416.m00288 expressed protein ; expression support... 33 0.52
At1g66840.1 68414.m07597 expressed protein contains Pfam profile... 33 0.52
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 31 1.6
At1g65010.1 68414.m07368 expressed protein similar to endosome-a... 31 1.6
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 31 2.1
At5g48600.1 68418.m06011 structural maintenance of chromosomes (... 31 2.8
At5g27220.1 68418.m03247 protein transport protein-related low s... 31 2.8
At3g53040.1 68416.m05846 late embryogenesis abundant protein, pu... 30 3.7
At2g42480.1 68415.m05255 meprin and TRAF homology domain-contain... 30 3.7
At1g33900.1 68414.m04202 avirulence-responsive protein, putative... 30 3.7
At2g31290.1 68415.m03820 expressed protein 30 4.8
At1g55690.3 68414.m06377 SEC14 cytosolic factor family protein /... 30 4.8
At1g55690.2 68414.m06376 SEC14 cytosolic factor family protein /... 30 4.8
At1g55690.1 68414.m06375 SEC14 cytosolic factor family protein /... 30 4.8
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 29 6.4
At5g52280.1 68418.m06488 protein transport protein-related low s... 29 8.4
At5g13560.1 68418.m01566 expressed protein weak similarity to SP... 29 8.4
At3g58840.1 68416.m06558 expressed protein 29 8.4
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 29 8.4
At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50... 29 8.4
At1g64330.1 68414.m07290 myosin heavy chain-related similar to m... 29 8.4
At1g21250.1 68414.m02656 wall-associated kinase 1 (WAK1) identic... 29 8.4
At1g08820.1 68414.m00982 vesicle-associated membrane family prot... 29 8.4
>At2g27170.1 68415.m06029 structural maintenance of chromosomes (SMC)
family protein similar to basement membrane-associated
chondroitin proteoglycan Bamacan [Rattus norvegicus]
GI:1785540; contains Pfam profile PF02463: RecF/RecN/SMC
N terminal domain. No suitalble start codon was
identified.
Length = 1207
Score = 37.5 bits (83), Expect = 0.024
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +1
Query: 100 TRVQGTAKQIED--LEKMAADNMQLTRDAKMKVGQANTDAREAEKQVSKGLEDLKIIMDE 273
T +Q T I+D L A Q DAK+ V +A + + + + + +K I DE
Sbjct: 834 TELQATIASIDDDSLPSSAGTKEQELDDAKLSVNEAAKELKSVCDSIDEKTKQIKKIKDE 893
Query: 274 LQNLPTLDDAALDRLQD 324
L TL+D LQD
Sbjct: 894 KAKLKTLEDDCKGTLQD 910
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 36.7 bits (81), Expect = 0.042
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Frame = +1
Query: 88 DKLSTRVQGTAKQIEDLEKMAADNMQLTRDAKMKVGQANTDAREAEKQV-SKGLEDLKI- 261
D+LS + Q AKQ+E+ ++ A + T DA ++ + +E Q+ K + LK
Sbjct: 1476 DELSKQNQSLAKQLEEAKEEAGK--RTTTDAVVEQSVKEREEKEKRIQILDKYVHQLKDE 1533
Query: 262 IMDELQNLPTLDDAALDRLQDSLDTAEKALKTVDLDGKIKSLTEAKNDHQRWMKEYQDEH 441
+ + ++L D+ L + + + EK + D KIK ++ ++ YQ
Sbjct: 1534 VRKKTEDLKKKDEE-LTKERSERKSVEKEVG--DSLTKIKKEKTKVDEELAKLERYQTAL 1590
Query: 442 DHLKIEVENIKDILNQLPDG 501
HL E+E +K LP+G
Sbjct: 1591 THLSEELEKLKHADGNLPEG 1610
>At4g02710.1 68417.m00366 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1111
Score = 35.1 bits (77), Expect = 0.13
Identities = 26/111 (23%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Frame = +1
Query: 79 EXADKLSTRVQGTAKQIEDLEKMAADNM---QLTRDAKMKVGQANTDAREAEKQVSKGLE 249
E T Q ++ E+L +A + Q+ +D +M+ + + + +A+ + +KGL
Sbjct: 493 EAETAFQTLQQLHSQSQEELNNLAVELQTVSQIMKDMEMRNNELHEELEQAKVE-NKGLN 551
Query: 250 DLKIIMDELQNLPTLDDAALDRLQDSLDTAEKALKTVDLDGKIKSLTEAKN 402
DL M++L + + ++ L L++ + LKT + +SL+E K+
Sbjct: 552 DLNFTMEKLVQKNLMLEKSISYLNSELESFRRKLKT--FEEACQSLSEEKS 600
Score = 33.5 bits (73), Expect = 0.39
Identities = 32/149 (21%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Frame = +1
Query: 76 HEXADKLSTRVQGTAKQIEDLEKMAADNMQLTRDAKMKVGQANTDAREAE--KQVSKGL- 246
HE ++ +G +EK+ N+ L + + + R+ + ++ + L
Sbjct: 537 HEELEQAKVENKGLNDLNFTMEKLVQKNLMLEKSISYLNSELESFRRKLKTFEEACQSLS 596
Query: 247 EDLKIIMDELQNLPTLDDAALDRLQD-SLDTAEKALKTVDLDGKIKS----LTEAKNDH- 408
E+ ++ E Q+ + ++ L+ L+ A + DL+GK K+ LT+A+ ++
Sbjct: 597 EEKSCLISENQHNVIENTVLIEWLRQLRLEAVGIATEKTDLEGKAKTIGDKLTDAETENL 656
Query: 409 --QRWMKEYQDEHDHLKIEVENIKDILNQ 489
+R + + E HL+ E+ N+KD L++
Sbjct: 657 QLKRNLLSIRSEKHHLEDEITNVKDQLHE 685
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 33.9 bits (74), Expect = 0.30
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 4/136 (2%)
Frame = +1
Query: 79 EXADKLSTRVQGTAKQIEDLEKMAADNMQ--LTRDAKMKVGQANTDAREAEKQVSKGLED 252
E K + A +++D K ++ M T + KM + +A T+A E Q + E
Sbjct: 607 ETLRKTRWKNASVAGKLQDEFKRLSEQMDSMFTSNEKMAM-KAMTEANELRMQKRQLEEM 665
Query: 253 LKIIMDELQNLPTLDDAALDRLQDSLD--TAEKALKTVDLDGKIKSLTEAKNDHQRWMKE 426
+K DEL+ +A L L + L T++ +LD K + K +
Sbjct: 666 IKDANDELRANQAEYEAKLHELSEKLSFKTSQMERMLENLDEKSNEIDNQKRHEEDVTAN 725
Query: 427 YQDEHDHLKIEVENIK 474
E LK E+EN+K
Sbjct: 726 LNQEIKILKEEIENLK 741
Score = 29.5 bits (63), Expect = 6.4
Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = +1
Query: 76 HEXADKLSTRVQGTAKQIEDLEKMA--ADNMQL-TRDAKMKVGQANTDAREAEKQVSKGL 246
HE ++KLS + + +E+L++ + DN + D + Q +E + + K
Sbjct: 685 HELSEKLSFKTSQMERMLENLDEKSNEIDNQKRHEEDVTANLNQEIKILKEEIENLKKNQ 744
Query: 247 EDLKIIMDELQNLPT-LDDAALDRLQDSLDTAEKALKTVDLDGKI 378
+ L + ++ +NL L+ ++ + +K ++L+ KI
Sbjct: 745 DSLMLQAEQAENLRVDLEKTKKSVMEAEASLQRENMKKIELESKI 789
>At3g02930.1 68416.m00288 expressed protein ; expression supported
by MPSS
Length = 806
Score = 33.1 bits (72), Expect = 0.52
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Frame = +1
Query: 217 EAEKQVSKGLEDLKIIMDELQNLPTLDDAALDRLQDSLDTAEKALKTVD--LDGKIKSLT 390
E++ Q + EDLK + + +L ALD+L+++ AE+A + +D L+ + KSL
Sbjct: 84 ESQPQSVQIKEDLKKANELIASLENEKAKALDQLKEARKEAEEASEKLDEALEAQKKSLE 143
Query: 391 EAKNDH----QRWMKEYQDEHDHLKIEVENIKD 477
+ + + ++ Q + + LK E+EN+K+
Sbjct: 144 NFEIEKFEVVEAGIEAVQRKEEELKKELENVKN 176
Score = 29.5 bits (63), Expect = 6.4
Identities = 18/90 (20%), Positives = 41/90 (45%)
Frame = +1
Query: 94 LSTRVQGTAKQIEDLEKMAADNMQLTRDAKMKVGQANTDAREAEKQVSKGLEDLKIIMDE 273
+ + + ++IE LE A ++ K+G A ++ ++EK+ K +L+ + +E
Sbjct: 353 MESEITDLKEKIELLEMTVASQKVDLEKSEQKLGIAEEESSKSEKEAEKLKNELETVNEE 412
Query: 274 LQNLPTLDDAALDRLQDSLDTAEKALKTVD 363
+ A +Q L+ +K L ++
Sbjct: 413 KTQALKKEQDATSSVQRLLEEKKKILSELE 442
>At1g66840.1 68414.m07597 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 607
Score = 33.1 bits (72), Expect = 0.52
Identities = 23/87 (26%), Positives = 39/87 (44%)
Frame = +1
Query: 88 DKLSTRVQGTAKQIEDLEKMAADNMQLTRDAKMKVGQANTDAREAEKQVSKGLEDLKIIM 267
++L+T++ Q+E + K L + + +D A+K+ K E+ +II
Sbjct: 331 ERLNTKLLIAKDQLEAVSKAEERISYLADNLTTSFEKLKSDREAAKKEELKLREEARIIN 390
Query: 268 DELQNLPTLDDAALDRLQDSLDTAEKA 348
+E+Q T D L LD EKA
Sbjct: 391 NEIQKTETGFDGKEKELLSKLDELEKA 417
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 31.5 bits (68), Expect = 1.6
Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 14/153 (9%)
Frame = +1
Query: 61 LQXIRHEXADKLSTRVQGTAKQIEDLEKMAADNMQLTRDAKMKVGQANTDAREAEKQVSK 240
L+ I + STRV Q+E E+ +D +DA+ + ++ E ++ +
Sbjct: 317 LRDIHETHQRESSTRVSELEAQLESSEQRISDLTVDLKDAEEENKAISSKNLEIMDKLEQ 376
Query: 241 GLEDLKIIMDEL-----------QNLPTLDDAALDRLQD---SLDTAEKALKTVDLDGKI 378
+K +MDEL L +L +A ++ D SLD AE+ K L +I
Sbjct: 377 AQNTIKELMDELGELKDRHKEKESELSSLVKSADQQVADMKQSLDNAEEEKKM--LSQRI 434
Query: 379 KSLTEAKNDHQRWMKEYQDEHDHLKIEVENIKD 477
++ + Q+ ++E+ E + LK E +K+
Sbjct: 435 LDISNEIQEAQKTIQEHMSESEQLK-ESHGVKE 466
Score = 29.9 bits (64), Expect = 4.8
Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 1/163 (0%)
Frame = +1
Query: 61 LQXIRHEXADKLSTRVQGTAKQIEDLEKMAADNMQLTRDAKMKVGQANTDAREAEKQVSK 240
L+ I +LST+++G Q+E E ++L+ K ++ T + + + S
Sbjct: 648 LRDIHETHQRELSTQLRGLEAQLESSEHRV---LELSESLKAAEEESRTMSTKI-SETSD 703
Query: 241 GLEDLKIIMDELQNLPTLDDAALDRLQDSLDTAEKALKTVDLDGKIKSLTEAKNDHQRWM 420
LE +I++ EL T D + +L++ L AEK + K+ LTE + Q +
Sbjct: 704 ELERTQIMVQEL----TADSS---KLKEQL--AEK-------ESKLFLLTEKDSKSQVQI 747
Query: 421 KEYQDEHDHLKIEVENIK-DILNQLPDGCFKRVVLEPTEGPSR 546
KE + L++E+E+++ I++ + K V+E E +R
Sbjct: 748 KELEATVATLELELESVRARIIDLETEIASKTTVVEQLEAQNR 790
>At1g65010.1 68414.m07368 expressed protein similar to
endosome-associated protein (GI:1016368) [Homo sapiens];
similar to Centromeric protein E (CENP-E protein)
(Swiss-Prot:Q02224) [Homo sapiens]
Length = 1318
Score = 31.5 bits (68), Expect = 1.6
Identities = 22/110 (20%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Frame = +1
Query: 190 VGQANTDAREAEKQVSKGLEDLKIIMDELQNLPTLDDAALDRLQDSLDTAEKALKTVDLD 369
+G+A ++ + ++ + EDLK + E+ +L + + L+++++ L +++L VD +
Sbjct: 577 LGEAKAESMKLKESLLDKEEDLKNVTAEISSLREWEGSVLEKIEE-LSKVKESL--VDKE 633
Query: 370 GKIKSLTEAKND-------HQRWMKEYQDEHDHLKIEVENIKDILNQLPD 498
K++S+T+ + H + ++E + L E ++ I+ + D
Sbjct: 634 TKLQSITQEAEELKGREAAHMKQIEELSTANASLVDEATKLQSIVQESED 683
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 31.1 bits (67), Expect = 2.1
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = +1
Query: 196 QANTDAREAEKQVSKGLED-LKIIMDELQN-LPTLDDAALDRLQDSLDTAEKALKTVDLD 369
Q D AE ++ + LKI + EL+ L + + A+++L DT K DL
Sbjct: 379 QEELDQSSAENELLADTNNQLKIKIQELEGYLDSEKETAIEKLNQK-DTEAK-----DLI 432
Query: 370 GKIKSLTEAKNDHQRWMKEYQDEHDHLKIEVENIKDILNQL 492
K+KS +H+R + E D K+EVE LN L
Sbjct: 433 TKLKSHENVIEEHKRQVLEASGVADTRKVEVEEALLKLNTL 473
>At5g48600.1 68418.m06011 structural maintenance of chromosomes
(SMC) family protein similar to SP|P50532 Chromosome
assembly protein XCAP-C {Xenopus laevis}; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1241
Score = 30.7 bits (66), Expect = 2.8
Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 4/138 (2%)
Frame = +1
Query: 88 DKLSTRVQGTAKQIEDLEKMAADNMQLTRDAKMKVGQANTDAREAEKQVSKGLEDLKIIM 267
+K ++ KQ+E L + + +Q+ + A+ + EAE + K L LK
Sbjct: 203 NKYVEKIDELNKQLETLNESRSGVVQMVKLAEKERDNLEGLKDEAETYMLKELSHLK--W 260
Query: 268 DELQNLPTLDD--AALDRLQDSLDTAEKALK--TVDLDGKIKSLTEAKNDHQRWMKEYQD 435
E +D A + +DSL E +LK V +D + L + ++ H++ K +
Sbjct: 261 QEKATKMAYEDTVAKITEQRDSLQNLENSLKDERVKMDESNEELKKFESVHEKHKKRQEV 320
Query: 436 EHDHLKIEVENIKDILNQ 489
+ L+ E K+ Q
Sbjct: 321 LDNELRACKEKFKEFERQ 338
>At5g27220.1 68418.m03247 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1181
Score = 30.7 bits (66), Expect = 2.8
Identities = 26/126 (20%), Positives = 58/126 (46%), Gaps = 3/126 (2%)
Frame = +1
Query: 85 ADKLSTRVQGTA-KQIEDLEKMAA--DNMQLTRDAKMKVGQANTDAREAEKQVSKGLEDL 255
++KL R + K++E + A + ++ A+ ++G A +V + E+L
Sbjct: 52 SEKLELRFRELVLKEVELQNRSFALEERAKVVEAAEAEMGDLEMKASGFRSEVEEKREEL 111
Query: 256 KIIMDELQNLPTLDDAALDRLQDSLDTAEKALKTVDLDGKIKSLTEAKNDHQRWMKEYQD 435
+ L+ + + +L + ++ K+ VDLD K + L + +R+ E ++
Sbjct: 112 GCLRKSLEECSVEERSKRGQLSEIVELLRKS--QVDLDLKGEELRQMVTHLERYRVEVKE 169
Query: 436 EHDHLK 453
E +HL+
Sbjct: 170 EKEHLR 175
>At3g53040.1 68416.m05846 late embryogenesis abundant protein,
putative / LEA protein, putative similar to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 479
Score = 30.3 bits (65), Expect = 3.7
Identities = 22/100 (22%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +1
Query: 79 EXADKLSTRVQGTAKQIEDLEKMAADNMQLTRDAKM-KVGQANTDAREAEKQVSKGLEDL 255
E ADK TA+++ + A+ T+DA + K+G+ A + K+ L
Sbjct: 254 ETADKAREAKDKTAEKVGEYRDYTAEKATETKDAGVSKIGELKDSAVDTAKRAMGFLSGK 313
Query: 256 KIIMDELQNLPTLDDAALDRLQDSLDTAEKALKTVDLDGK 375
+ Q D A +++ ++ + A + ++ + L+GK
Sbjct: 314 --TEETKQKAVETKDTAKEKMDEAGEEARRKMEEMRLEGK 351
>At2g42480.1 68415.m05255 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 743
Score = 30.3 bits (65), Expect = 3.7
Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 4/139 (2%)
Frame = +1
Query: 73 RHEXADKLSTRVQGTAKQIEDLEKMAADNMQLTRDAKMKVGQANTDAREAEKQVSKGLED 252
R + D +RVQ ++++D+E + ++ K K A+ + K + + D
Sbjct: 293 RKKSYDADGSRVQQLEERVKDIELILKSKLEEVSSEKKKKADADGSLEDRVKNLELMVSD 352
Query: 253 LKIIMDELQNLPTLDDAALD----RLQDSLDTAEKALKTVDLDGKIKSLTEAKNDHQRWM 420
LK+ +D + + D L R++ S E KT +I++ +E K + W
Sbjct: 353 LKVEVDNEKAKSSADGFLLVEESLRIKASKRDMENHQKT-SFTFEIENFSERK--YLIWS 409
Query: 421 KEYQDEHDHLKIEVENIKD 477
+ H ++V IKD
Sbjct: 410 PIFISGQCHWFVKVYPIKD 428
>At1g33900.1 68414.m04202 avirulence-responsive protein, putative /
avirulence induced gene protein, putative / AIG protein,
putative similar to SP|P54120 AIG1 protein {Arabidopsis
thaliana}; contains Pfam profile PF04548: AIG1 family
Length = 326
Score = 30.3 bits (65), Expect = 3.7
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = +1
Query: 205 TDAREAEKQVSKGLEDLKIIMDELQNLPTLDDAALDRLQDSLDTAEKALKTVDLDGKIKS 384
TD + KQV + L + I +P D+ ++Q +T + K V+ K
Sbjct: 188 TDEGKKVKQVQELLAHVAAIEKSTSGIPFTDEMHR-KIQKEAETLREQQKEVES----KD 242
Query: 385 LTEAKNDHQRWMKEYQDEHD 444
L A + ++W K YQ EHD
Sbjct: 243 LAAA--EIEKWKKHYQTEHD 260
>At2g31290.1 68415.m03820 expressed protein
Length = 415
Score = 29.9 bits (64), Expect = 4.8
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2
Query: 440 MTISRSRWRI*KTS*ISCPTAVSRGSFWNQPKVPADRLALDRRKK*TLNNRL*RYYLR 613
M ++R +RI T P + R S W+ K P AL R K+ +N+RL LR
Sbjct: 1 MAMTRELYRILGTK--YAPLLIRRFSLWSTKKDPDLESALSRNKRWIVNSRLKNIILR 56
>At1g55690.3 68414.m06377 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
similar to phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus] and Phosphatidylinositol
Transfer Protein GB:2780955 GI:2780955 [Saccharomyces
cerevisiae]
Length = 621
Score = 29.9 bits (64), Expect = 4.8
Identities = 31/149 (20%), Positives = 61/149 (40%), Gaps = 2/149 (1%)
Frame = +1
Query: 61 LQXIRHEXADKLSTRVQGTAKQIEDLEKMAADNMQLTRDAKMKVGQANTDAREAEKQVS- 237
L R +D + + +I +L+K A + + K G+ D R +
Sbjct: 10 LDEFRERRSDFEISEDERRRSKIGNLKKKAINASTKFTHSLKKRGKRKIDYRVPAVSIED 69
Query: 238 -KGLEDLKIIMDELQNLPTLDDAALDRLQDSLDTAEKALKTVDLDGKIKSLTEAKNDHQR 414
+ ++ ++++ + L L+ L D T + LK DL+ I+ T+ + R
Sbjct: 70 VRDEKEESVVLEFRRKL--LERDLLPPRHDEYHTLLRFLKARDLN--IEKTTQLWEEMLR 125
Query: 415 WMKEYQDEHDHLKIEVENIKDILNQLPDG 501
W KEY + + E ++++L P G
Sbjct: 126 WRKEYGTDTILEDFDFEELEEVLQYYPQG 154
>At1g55690.2 68414.m06376 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
similar to phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus] and Phosphatidylinositol
Transfer Protein GB:2780955 GI:2780955 [Saccharomyces
cerevisiae]
Length = 625
Score = 29.9 bits (64), Expect = 4.8
Identities = 31/149 (20%), Positives = 61/149 (40%), Gaps = 2/149 (1%)
Frame = +1
Query: 61 LQXIRHEXADKLSTRVQGTAKQIEDLEKMAADNMQLTRDAKMKVGQANTDAREAEKQVS- 237
L R +D + + +I +L+K A + + K G+ D R +
Sbjct: 10 LDEFRERRSDFEISEDERRRSKIGNLKKKAINASTKFTHSLKKRGKRKIDYRVPAVSIED 69
Query: 238 -KGLEDLKIIMDELQNLPTLDDAALDRLQDSLDTAEKALKTVDLDGKIKSLTEAKNDHQR 414
+ ++ ++++ + L L+ L D T + LK DL+ I+ T+ + R
Sbjct: 70 VRDEKEESVVLEFRRKL--LERDLLPPRHDEYHTLLRFLKARDLN--IEKTTQLWEEMLR 125
Query: 415 WMKEYQDEHDHLKIEVENIKDILNQLPDG 501
W KEY + + E ++++L P G
Sbjct: 126 WRKEYGTDTILEDFDFEELEEVLQYYPQG 154
>At1g55690.1 68414.m06375 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
similar to phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus] and Phosphatidylinositol
Transfer Protein GB:2780955 GI:2780955 [Saccharomyces
cerevisiae]
Length = 625
Score = 29.9 bits (64), Expect = 4.8
Identities = 31/149 (20%), Positives = 61/149 (40%), Gaps = 2/149 (1%)
Frame = +1
Query: 61 LQXIRHEXADKLSTRVQGTAKQIEDLEKMAADNMQLTRDAKMKVGQANTDAREAEKQVS- 237
L R +D + + +I +L+K A + + K G+ D R +
Sbjct: 10 LDEFRERRSDFEISEDERRRSKIGNLKKKAINASTKFTHSLKKRGKRKIDYRVPAVSIED 69
Query: 238 -KGLEDLKIIMDELQNLPTLDDAALDRLQDSLDTAEKALKTVDLDGKIKSLTEAKNDHQR 414
+ ++ ++++ + L L+ L D T + LK DL+ I+ T+ + R
Sbjct: 70 VRDEKEESVVLEFRRKL--LERDLLPPRHDEYHTLLRFLKARDLN--IEKTTQLWEEMLR 125
Query: 415 WMKEYQDEHDHLKIEVENIKDILNQLPDG 501
W KEY + + E ++++L P G
Sbjct: 126 WRKEYGTDTILEDFDFEELEEVLQYYPQG 154
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 29.5 bits (63), Expect = 6.4
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Frame = +1
Query: 205 TDAREAEKQVSKGLEDLKIIMDELQNLPTLDDAALDRLQDSLDTAEKALKTVDLDGKIKS 384
T++ + ++S+ EDLK + + +L ALD L+ + AE+ +D K +
Sbjct: 91 TESPQTTTRLSQIKEDLKKANERISSLEKDKAKALDELKQAKKEAEQVTLKLDDALKAQK 150
Query: 385 LTEAKNDHQRW------MKEYQDEHDHLKIEVENIKD 477
E ++ +++ ++ Q+ + LK E+E +K+
Sbjct: 151 HVEENSEIEKFQAVEAGIEAVQNNEEELKKELETVKN 187
>At5g52280.1 68418.m06488 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 853
Score = 29.1 bits (62), Expect = 8.4
Identities = 23/130 (17%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Frame = +1
Query: 100 TRVQGTAKQIEDLEKMAADNMQLTRDAKMKVGQANTDAREAEKQVSKGLEDLKIIMDELQ 279
T+ + K +E+ K + +Q+ +K+ + ++ A + K +++ + DE +
Sbjct: 634 TQEKEQRKHVEEKNKALSMKVQMLESEVLKLTKLRDESSAAATETEKIIQEWRKERDEFE 693
Query: 280 NLPTLDDAALDRLQDSLDTA-----EKALKTVDLDGKIKSLTEAKNDHQRWMKEYQDEHD 444
+L Q L +K + +L +++ L+ ++ Q + + E+D
Sbjct: 694 RKLSLAKEVAKTAQKELTLTKSSNDDKETRLRNLKTEVEGLSLQYSELQNSFVQEKMEND 753
Query: 445 HLKIEVENIK 474
L+ +V N+K
Sbjct: 754 ELRKQVSNLK 763
>At5g13560.1 68418.m01566 expressed protein weak similarity to
SP|O42184 Restin (Cytoplasmic linker protein-170)
(CLIP-170) {Gallus gallus}
Length = 679
Score = 29.1 bits (62), Expect = 8.4
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1
Query: 70 IRHEXADKLSTRVQGTAKQIEDLEKMAADN-MQLTRDAKMKVGQANTDAREAEKQVSKGL 246
I + DKL ++ A EK ++N +Q K +V +AN + E EK++ +
Sbjct: 297 IHAQKVDKLRVLLESLANSTSKAEKRISENRLQKEEALKARVVKAN-ETGEKEKELGAEI 355
Query: 247 EDLKIIMDELQ 279
L+ DEL+
Sbjct: 356 AQLEKQRDELE 366
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 29.1 bits (62), Expect = 8.4
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 331 DTAEKALKTVDLDGKIKSLTEAKNDHQRWMKEYQDEHDHLKIEVENIKDI 480
D + +KT +L+ KI+ + + R +E ++ + L E+E +KD+
Sbjct: 14 DYDQGGVKTTELERKIEDMENKNQELTRENRELKERLERLTGEIEEMKDV 63
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 29.1 bits (62), Expect = 8.4
Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 12/145 (8%)
Frame = +1
Query: 91 KLSTRVQGTAKQIEDLEKMAADNMQLTRDAKMKVGQANTDAREAEKQVSKGLEDLKIIMD 270
KL V + +I + E + + K+ D + A Q S+ +E LK +
Sbjct: 157 KLEATVDEYSVKISESENLLESIRNELNVTQGKLESIENDLKAAGLQESEVMEKLKSAEE 216
Query: 271 EL-QNLPTLDDAALDRLQ----------DSLDTAEKALKT-VDLDGKIKSLTEAKNDHQR 414
L Q +D+A R++ DS +KA++ D + SLTE D +
Sbjct: 217 SLEQKGREIDEATTKRMELEALHQSLSIDSEHRLQKAMEEFTSRDSEASSLTEKLRDLEG 276
Query: 415 WMKEYQDEHDHLKIEVENIKDILNQ 489
+K Y+++ + ++K+ L Q
Sbjct: 277 KIKSYEEQLAEASGKSSSLKEKLEQ 301
>At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50)
identical to DNA repair-recombination protein GI:7110148
from [Arabidopsis thaliana]
Length = 1316
Score = 29.1 bits (62), Expect = 8.4
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = +1
Query: 205 TDAREAEKQVSKG-LEDLKIIMDELQNLPTLDDAAL----DRLQDSLDTAEKALKTVDLD 369
T A E K++ K +++K +L+NL TL DAA QD T ++ ++L+
Sbjct: 187 TKALEVIKKLHKDQAQEIKTFKLKLENLQTLKDAAYKLRESIAQDQERTESSKVQMLELE 246
Query: 370 GKIKSLTEAKNDHQRWMKEYQDEHDHLKIE 459
++ + ++ + +K+ + D + I+
Sbjct: 247 TSVQKVDAEVHNKEMMLKDLRKLQDQVSIK 276
>At1g64330.1 68414.m07290 myosin heavy chain-related similar to
myosin heavy chain (GI:1850913) [Entamoeba histolytica];
similar to Intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae]
Length = 555
Score = 29.1 bits (62), Expect = 8.4
Identities = 30/137 (21%), Positives = 61/137 (44%), Gaps = 2/137 (1%)
Frame = +1
Query: 85 ADKLSTRVQGTAKQIEDLEKMAAD-NMQLTRDAKMKVGQANTDAREAEKQVSKGLEDLKI 261
+DK S R +IE L+K D N+++ D KMK+ + E + + L+ LK
Sbjct: 106 SDKKSKRNGRGENEIELLKKQMEDANLEIA-DLKMKLATTDEHKEAVESEHQEILKKLKE 164
Query: 262 IMDELQNLPTLDDAALDRLQDSLDTAEKALKT-VDLDGKIKSLTEAKNDHQRWMKEYQDE 438
+ NL + ++ + E A +T DL+ K++ + + ++ + + +
Sbjct: 165 SDEICGNLRVETEKLTSENKELNEKLEVAGETESDLNQKLEDVKKERDGLEAELASKAKD 224
Query: 439 HDHLKIEVENIKDILNQ 489
H+ EV ++ N+
Sbjct: 225 HESTLEEVNRLQGQKNE 241
>At1g21250.1 68414.m02656 wall-associated kinase 1 (WAK1) identical
to wall-associated kinase 1 [Arabidopsis thaliana]
GI:3549626; expressed in leaves and stems & induced by
pathogen infection (PMID:10380805)
Length = 735
Score = 29.1 bits (62), Expect = 8.4
Identities = 16/63 (25%), Positives = 34/63 (53%)
Frame = +1
Query: 262 IMDELQNLPTLDDAALDRLQDSLDTAEKALKTVDLDGKIKSLTEAKNDHQRWMKEYQDEH 441
+M+E NL + +AA + + E+ + ++ K+++L K H +W +Y +E+
Sbjct: 642 VMNE-DNLKEIQEAARIAAECTRLMGEERPRMKEVAAKLEALRVEKTKH-KWSDQYPEEN 699
Query: 442 DHL 450
+HL
Sbjct: 700 EHL 702
>At1g08820.1 68414.m00982 vesicle-associated membrane family protein
/ VAMP family protein similar to VAP27 GI:6688926
[Nicotiana plumbaginifolia]
Length = 386
Score = 29.1 bits (62), Expect = 8.4
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Frame = +1
Query: 160 MQLTRDAKMKVGQANTDAREAEKQVSKGLEDLKIIMDELQNLPTLDDAAL----DRLQDS 327
M+ D G N A ++E ++SK + +++ + QN+ LD+ L + ++
Sbjct: 254 MKKAMDLPRDQGFTNGIAVDSEPKISKERDVVQLQKTDGQNVRGLDELKLVKDIEEMKLK 313
Query: 328 LDTAEKALKTVDLDGKIKSLTEAKNDHQRWMKEYQDEHDHLKIEVENIKDILNQLP 495
+D E LK D I L E ++ + + Q E L+ + + +K++ N P
Sbjct: 314 VDALESKLK--QADSTISKLMEERSISSQHRQSLQHELAELRTK-KIVKEVHNGFP 366
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,343,000
Number of Sequences: 28952
Number of extensions: 437865
Number of successful extensions: 1206
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 12,070,560
effective HSP length: 84
effective length of database: 9,638,592
effective search space used: 4260257664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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