Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_G11_e375_13.seq
(1582 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001221-1|AAH01221.1| 535|Homo sapiens nuclear receptor bindin... 58 9e-08
AK223136-1|BAD96856.1| 535|Homo sapiens nuclear receptor bindin... 58 9e-08
AK001946-1|BAA91993.1| 535|Homo sapiens protein ( Homo sapiens ... 58 9e-08
AF113249-1|AAF21967.1| 535|Homo sapiens multiple domain putativ... 58 9e-08
AC074117-4|AAY14847.1| 535|Homo sapiens unknown protein. 58 9e-08
AK027538-1|BAB55185.1| 535|Homo sapiens protein ( Homo sapiens ... 56 4e-07
CR457350-1|CAG33631.1| 258|Homo sapiens LOC340371 protein. 52 4e-06
BC113873-1|AAI13874.1| 258|Homo sapiens NRBP2 protein protein. 52 4e-06
AL137662-1|CAB70864.1| 258|Homo sapiens hypothetical protein pr... 52 4e-06
>BC001221-1|AAH01221.1| 535|Homo sapiens nuclear receptor binding
protein 1 protein.
Length = 535
Score = 58.0 bits (134), Expect = 9e-08
Identities = 25/54 (46%), Positives = 40/54 (74%)
Frame = +2
Query: 140 MTILLRMDDKMNRQLTCPVTRADTAAALAHELVQLGFIHEADRDKICRLMEDSL 301
+T+LL+++DK+NR L+C + + LA ELVQLGFI EAD+ ++ L+E++L
Sbjct: 462 LTLLLKLEDKLNRHLSCDLMPNENIPELAAELVQLGFISEADQSRLTSLLEETL 515
>AK223136-1|BAD96856.1| 535|Homo sapiens nuclear receptor binding
protein variant protein.
Length = 535
Score = 58.0 bits (134), Expect = 9e-08
Identities = 25/54 (46%), Positives = 40/54 (74%)
Frame = +2
Query: 140 MTILLRMDDKMNRQLTCPVTRADTAAALAHELVQLGFIHEADRDKICRLMEDSL 301
+T+LL+++DK+NR L+C + + LA ELVQLGFI EAD+ ++ L+E++L
Sbjct: 462 LTLLLKLEDKLNRHLSCDLMPNENIPELAAELVQLGFISEADQSRLTSLLEETL 515
>AK001946-1|BAA91993.1| 535|Homo sapiens protein ( Homo sapiens
cDNA FLJ11084 fis, clone PLACE1005243, weakly similar to
SERINE/THREONINE PROTEIN KINASE PKPA (EC 2.7.1.-). ).
Length = 535
Score = 58.0 bits (134), Expect = 9e-08
Identities = 25/54 (46%), Positives = 40/54 (74%)
Frame = +2
Query: 140 MTILLRMDDKMNRQLTCPVTRADTAAALAHELVQLGFIHEADRDKICRLMEDSL 301
+T+LL+++DK+NR L+C + + LA ELVQLGFI EAD+ ++ L+E++L
Sbjct: 462 LTLLLKLEDKLNRHLSCDLMPNENIPELAAELVQLGFISEADQSRLTSLLEETL 515
>AF113249-1|AAF21967.1| 535|Homo sapiens multiple domain putative
nuclear protein protein.
Length = 535
Score = 58.0 bits (134), Expect = 9e-08
Identities = 25/54 (46%), Positives = 40/54 (74%)
Frame = +2
Query: 140 MTILLRMDDKMNRQLTCPVTRADTAAALAHELVQLGFIHEADRDKICRLMEDSL 301
+T+LL+++DK+NR L+C + + LA ELVQLGFI EAD+ ++ L+E++L
Sbjct: 462 LTLLLKLEDKLNRHLSCDLMPNENIPELAAELVQLGFISEADQSRLTSLLEETL 515
>AC074117-4|AAY14847.1| 535|Homo sapiens unknown protein.
Length = 535
Score = 58.0 bits (134), Expect = 9e-08
Identities = 25/54 (46%), Positives = 40/54 (74%)
Frame = +2
Query: 140 MTILLRMDDKMNRQLTCPVTRADTAAALAHELVQLGFIHEADRDKICRLMEDSL 301
+T+LL+++DK+NR L+C + + LA ELVQLGFI EAD+ ++ L+E++L
Sbjct: 462 LTLLLKLEDKLNRHLSCDLMPNENIPELAAELVQLGFISEADQSRLTSLLEETL 515
>AK027538-1|BAB55185.1| 535|Homo sapiens protein ( Homo sapiens
cDNA FLJ14632 fis, clone NT2RP2000668, weakly similar to
SERINE/THREONINE PROTEIN KINASE PKPA (EC 2.7.1.-). ).
Length = 535
Score = 56.0 bits (129), Expect = 4e-07
Identities = 24/54 (44%), Positives = 40/54 (74%)
Frame = +2
Query: 140 MTILLRMDDKMNRQLTCPVTRADTAAALAHELVQLGFIHEADRDKICRLMEDSL 301
+T+LL+++DK++R L+C + + LA ELVQLGFI EAD+ ++ L+E++L
Sbjct: 462 LTLLLKLEDKLSRHLSCDLMPNENIPELAAELVQLGFISEADQSRLTSLLEETL 515
>CR457350-1|CAG33631.1| 258|Homo sapiens LOC340371 protein.
Length = 258
Score = 52.4 bits (120), Expect = 4e-06
Identities = 25/61 (40%), Positives = 38/61 (62%)
Frame = +2
Query: 140 MTILLRMDDKMNRQLTCPVTRADTAAALAHELVQLGFIHEADRDKICRLMEDSLRSSFGQ 319
+T+LL ++D+++RQLT + D+A LA ELV GF+HE DR K+ +E + G
Sbjct: 197 LTLLLVLEDRLHRQLTYDLLPTDSAQDLASELVHYGFLHEDDRMKLAAFLESTFLKYRGT 256
Query: 320 Q 322
Q
Sbjct: 257 Q 257
>BC113873-1|AAI13874.1| 258|Homo sapiens NRBP2 protein protein.
Length = 258
Score = 52.4 bits (120), Expect = 4e-06
Identities = 25/61 (40%), Positives = 38/61 (62%)
Frame = +2
Query: 140 MTILLRMDDKMNRQLTCPVTRADTAAALAHELVQLGFIHEADRDKICRLMEDSLRSSFGQ 319
+T+LL ++D+++RQLT + D+A LA ELV GF+HE DR K+ +E + G
Sbjct: 197 LTLLLVLEDRLHRQLTYDLLPTDSAQDLASELVHYGFLHEDDRMKLAAFLESTFLKYRGT 256
Query: 320 Q 322
Q
Sbjct: 257 Q 257
>AL137662-1|CAB70864.1| 258|Homo sapiens hypothetical protein
protein.
Length = 258
Score = 52.4 bits (120), Expect = 4e-06
Identities = 25/61 (40%), Positives = 38/61 (62%)
Frame = +2
Query: 140 MTILLRMDDKMNRQLTCPVTRADTAAALAHELVQLGFIHEADRDKICRLMEDSLRSSFGQ 319
+T+LL ++D+++RQLT + D+A LA ELV GF+HE DR K+ +E + G
Sbjct: 197 LTLLLVLEDRLHRQLTYDLLPTDSAQDLASELVHYGFLHEDDRMKLAAFLESTFLKYRGT 256
Query: 320 Q 322
Q
Sbjct: 257 Q 257
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,309,244
Number of Sequences: 237096
Number of extensions: 1412502
Number of successful extensions: 2635
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2635
length of database: 76,859,062
effective HSP length: 94
effective length of database: 54,572,038
effective search space used: 23575120416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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