Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_G09_e359_13.seq
(1438 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK126884-1|BAC86735.1| 175|Homo sapiens protein ( Homo sapiens ... 40 0.017
AK057435-1|BAB71485.1| 170|Homo sapiens protein ( Homo sapiens ... 40 0.017
AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens ... 39 0.039
AK128416-1|BAC87430.1| 303|Homo sapiens protein ( Homo sapiens ... 33 2.6
AK128083-1|BAC87264.1| 225|Homo sapiens protein ( Homo sapiens ... 33 2.6
AK124805-1|BAC85954.1| 189|Homo sapiens protein ( Homo sapiens ... 33 2.6
AK096940-1|BAC04906.1| 226|Homo sapiens protein ( Homo sapiens ... 33 2.6
AK123631-1|BAC85667.1| 207|Homo sapiens protein ( Homo sapiens ... 32 4.5
AK128694-1|BAC87575.1| 291|Homo sapiens protein ( Homo sapiens ... 32 5.9
AK126213-1|BAC86488.1| 262|Homo sapiens protein ( Homo sapiens ... 32 5.9
>AK126884-1|BAC86735.1| 175|Homo sapiens protein ( Homo sapiens
cDNA FLJ44936 fis, clone BRAMY3018121. ).
Length = 175
Score = 40.3 bits (90), Expect = 0.017
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +3
Query: 261 TLTRSRTAPHGGTHAYARAHARTCTCTYVCTNMRTHVLTH*QRPPATQPHT*CRVHAII 437
TLT ++T H THA+ + TCTY T ++ H+ TH T HT +HA I
Sbjct: 71 TLTCTQTHTHICTHAHTLTYTHIHTCTYKRTYIQGHIHTHMHTYTCTCTHTHKHIHAHI 129
Score = 34.3 bits (75), Expect = 1.1
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +3
Query: 288 HGGTHAYARAHARTCTCTYVCTNMRTHVLTH*QRPPATQPHT*CRVH 428
H TH + AH RTC T CT+ TH+ TH HT + H
Sbjct: 6 HTCTHTHTHAHIRTCIHT--CTDTHTHMHTHTLTYTHIHMHTHTQTH 50
Score = 34.3 bits (75), Expect = 1.1
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 279 TAPHGGTHAYARAHARTCTCTYVCTNMRTHVL--TH*QRPPATQPHT*CRVH 428
T H THA+ R TCT T+ T+M TH L TH TQ H + H
Sbjct: 7 TCTHTHTHAHIRTCIHTCTDTH--THMHTHTLTYTHIHMHTHTQTHIYTQAH 56
Score = 34.3 bits (75), Expect = 1.1
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 8/59 (13%)
Frame = +3
Query: 261 TLTRSRTAPHGGTHAYARAHARTCT--------CTYVCTNMRTHVLTH*QRPPATQPHT 413
T T H TH Y +AH +CT T CT TH+ TH T HT
Sbjct: 37 TYTHIHMHTHTQTHIYTQAHIHSCTQINIYTYAYTLTCTQTHTHICTHAHTLTYTHIHT 95
Score = 31.5 bits (68), Expect = 7.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 255 LSTLTRSRTAPHGGTHAYARAHARTCTCTYVCTNMRTHVLTH 380
+ T T RT G H + H TCTCT+ ++ H+ H
Sbjct: 93 IHTCTYKRTYIQG--HIHTHMHTYTCTCTHTHKHIHAHIHIH 132
>AK057435-1|BAB71485.1| 170|Homo sapiens protein ( Homo sapiens
cDNA FLJ32873 fis, clone TESTI2003998, weakly similar to
T-CELL RECEPTOR BETA CHAIN ANA 11. ).
Length = 170
Score = 40.3 bits (90), Expect = 0.017
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +3
Query: 288 HGGTHAYARAHARTCTCTYVCTNMRTHVLTH*QRPPATQPHT*CRVH 428
H T ++ HA T T TY CT+ TH +TH TQ T +H
Sbjct: 80 HTDTDMHSHTHAHTQTWTYTCTHTHTHAVTHVHMHAGTQTRTYTTLH 126
Score = 35.9 bits (79), Expect = 0.36
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = +3
Query: 261 TLTRSRTAPHGGTHAYARAHARTCTCTYVCTNMRTHVLTH*QRPPATQPHT 413
T TR+ T H H A TCTCT+ T+ H H TQ HT
Sbjct: 117 TQTRTYTTLHKHAHTDTNTCAHTCTCTHT-THRHAHTRAHRHAHTRTQRHT 166
Score = 35.1 bits (77), Expect = 0.64
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 264 LTRSRTAPHGGTHAYARAHARTCTCTYVCTNMRTHVLTH 380
LTR+ T H TH + AH + CT+ NM H+ TH
Sbjct: 43 LTRTDTPKHAHTHVHIYAHMQ--ICTHANANMHAHMYTH 79
>AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ45698 fis, clone FEBRA2017811. ).
Length = 415
Score = 39.1 bits (87), Expect = 0.039
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 279 TAPHGGTHAYARAHARTCTCTYVCTNMRTHVLTH*QRPPATQPHT*CRVH 428
T H THAY H T TCT++ +++ T TH R T HT +H
Sbjct: 3 THMHIYTHAYTHMHTDTHTCTHIHSHIHTFTCTHIHRRTYTHRHTHTLMH 52
Score = 35.9 bits (79), Expect = 0.36
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +3
Query: 279 TAPHGGTHAYARAHARTCTCTYVCTNMRTHVLTH*QRPPATQPHT*CRVHA 431
T H H Y AH CT ++ + TH+ TH P T HT +H+
Sbjct: 235 TWTHTHAHTYTHAHIHVCTHIHMHIHTYTHMHTHMDTYPHTHIHTCTHMHS 285
Score = 35.5 bits (78), Expect = 0.48
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +3
Query: 288 HGGTHAYARAHARTCTCTYVCTNMRTHVLTH*QRPPATQPHT*CRVH 428
H H + H TCT T VCT+ H+ TH H+ +H
Sbjct: 124 HMNIHTHTCTHIYTCTYTVVCTHTHMHIYTHMHTHTCIHIHSDTHLH 170
Score = 33.5 bits (73), Expect = 1.9
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +3
Query: 252 KLSTLTRSRTAPHGGTHA--YARAHARTCTCTYVCTNMRTHVLTH*QRPPATQPHT*CRV 425
++ T T + H TH Y H T TCT + ++ TH+ H P + HT
Sbjct: 182 QIHTCTHTHIHIHMPTHTRTYTHMHTHTLTCTQI--HIYTHIYMHAHTPIHSHIHTWTHT 239
Query: 426 HAIISGFYKY*LINIAHNNFLYIYKY 503
HA Y + I++ + ++I+ Y
Sbjct: 240 HA---HTYTHAHIHVCTHIHMHIHTY 262
Score = 33.1 bits (72), Expect = 2.6
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 288 HGGTHAYARAHARTCTCTYVCTNMRTHVLTH*QRPPATQPHT*CRVHAI 434
H TH + H TCT T + T TH+ H P T+ +T H +
Sbjct: 164 HSDTHLHIYTHTLTCTQTQIHTCTHTHI--HIHMPTHTRTYTHMHTHTL 210
Score = 32.7 bits (71), Expect = 3.4
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +3
Query: 261 TLTRSRTAPHGGTHAYARAHARTCTCTYVCTNMRTHVLT 377
TLT ++T H TH + H T T TY T+M TH LT
Sbjct: 175 TLTCTQTQIHTCTHTHIHIHMPTHTRTY--THMHTHTLT 211
Score = 32.7 bits (71), Expect = 3.4
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +3
Query: 273 SRTAPHGGTHAYARAHARTCTCTYVCTNMRTHVLTH*QRPPATQPHT*CRVH 428
+ T H THA+A H T TY T++RT+ TH Q T H H
Sbjct: 303 THTHTHTYTHAHAHIHINTYMHTYTYTHIRTY--THIQMHTLTWTHIHTHTH 352
Score = 32.3 bits (70), Expect = 4.5
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +3
Query: 255 LSTLTRSRTAPHGGTHAYARAHARTCTCTYVCTNMRTHVLTH*QRPPATQPHT*CRVH 428
+ T T + T H H + + T TCT++ T T V TH T HT +H
Sbjct: 105 MHTYTHAHTHAHIHIHVHIHMNIHTHTCTHIYTCTYTVVCTHTHMHIYTHMHTHTCIH 162
Score = 32.3 bits (70), Expect = 4.5
Identities = 19/73 (26%), Positives = 30/73 (41%)
Frame = +3
Query: 210 HISFALTIYFLQK*KLSTLTRSRTAPHGGTHAYARAHARTCTCTYVCTNMRTHVLTH*QR 389
H+ + I+ + T T + H TH + H T TC ++ ++ H+ TH
Sbjct: 120 HVHIHMNIHTHTCTHIYTCTYTVVCTH--THMHIYTHMHTHTCIHIHSDTHLHIYTHTLT 177
Query: 390 PPATQPHT*CRVH 428
TQ HT H
Sbjct: 178 CTQTQIHTCTHTH 190
>AK128416-1|BAC87430.1| 303|Homo sapiens protein ( Homo sapiens
cDNA FLJ46559 fis, clone THYMU3040126. ).
Length = 303
Score = 33.1 bits (72), Expect = 2.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 370 TCVRMFVHTYVHVHVRACARAYACVPPCGAVRERV 266
TCV + H Y+H HV C + + C V R+
Sbjct: 145 TCVCVCTHAYIHTHVYVCVHTHIYIHMCVCVYTRI 179
>AK128083-1|BAC87264.1| 225|Homo sapiens protein ( Homo sapiens
cDNA FLJ46204 fis, clone TESTI4009501. ).
Length = 225
Score = 33.1 bits (72), Expect = 2.6
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = +3
Query: 267 TRSRTAPHGGTHAYARAHARTCTCTYVCTNMRTHVLTH*QRPPATQPHT*CRVHAIISGF 446
T + + H T +HA +CT T T+M TH TH +T T H + F
Sbjct: 140 THAHSHYHTRTLTLTHSHAHSCTLTSTITHMHTHTHTHMHTHTSTLTRTLTLTHTHMHTF 199
>AK124805-1|BAC85954.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ42815 fis, clone BRCAN2014143. ).
Length = 189
Score = 33.1 bits (72), Expect = 2.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -1
Query: 370 TCVRMFVHTYVHVHVRACARAYACVPPCGAVRERVKVDSFHFCKKYI 230
TCV M HT++ V+ ACA CV V R + ++ + + YI
Sbjct: 112 TCVYMRTHTHICVYACACAHMCVCVRVHTYVCMRAYIHAYMYVRTYI 158
>AK096940-1|BAC04906.1| 226|Homo sapiens protein ( Homo sapiens
cDNA FLJ39621 fis, clone SMINT2001158. ).
Length = 226
Score = 33.1 bits (72), Expect = 2.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 261 TLTRSRTAPHGGTHAYARAHARTCTCTYVCTNMRTHVLTH 380
TLT + H TH++ +H T T++ T+ TH+ TH
Sbjct: 24 TLTHIHSHTHPLTHSHPLSHTYPLTLTHIHTHPHTHISTH 63
Score = 33.1 bits (72), Expect = 2.6
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Frame = +3
Query: 258 STLTRSRTAPHGGTHAYARA----HARTCTCTYVCTNMRTHVLTH*QRPPATQPHT*CRV 425
ST+T + + H H Y H T T TY T+ TH TH T HT
Sbjct: 124 STVTHTHSHTHAHKHTYTHTSTHTHPLTFTHTYPITHPLTHTPTHTHTHALTHSHTHIHT 183
Query: 426 H 428
H
Sbjct: 184 H 184
Score = 32.3 bits (70), Expect = 4.5
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +3
Query: 267 TRSRTAPHGGTHAYARAHARTCTCTYVCTNMRTHVLTH*QRPPATQPHT*CRVHA 431
T + T H THA+ + T T T+ T T+ +TH T HT H+
Sbjct: 123 TSTVTHTHSHTHAHKHTYTHTSTHTHPLTFTHTYPITHPLTHTPTHTHTHALTHS 177
>AK123631-1|BAC85667.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ41637 fis, clone FEBRA1000030, weakly similar
to T-CELL RECEPTOR BETA CHAIN ANA 11. ).
Length = 207
Score = 32.3 bits (70), Expect = 4.5
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 8/52 (15%)
Frame = +3
Query: 288 HGGTHAYARAHARTCTC------TYVCTNMRTHVLTH*Q--RPPATQPHT*C 419
H THA+ HA T +C Y+ T+ TH TH PP T H C
Sbjct: 2 HACTHAHTHTHAHTLSCKVEIWGQYLPTHTHTHTHTHAHCPVPPYTHAHAVC 53
>AK128694-1|BAC87575.1| 291|Homo sapiens protein ( Homo sapiens
cDNA FLJ46861 fis, clone UTERU3011092. ).
Length = 291
Score = 31.9 bits (69), Expect = 5.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 355 FVHTYVHVHVRACARAYACVPPC 287
+V++YVH+H C Y CV C
Sbjct: 155 YVYSYVHMHAYVCVHMYTCVHMC 177
>AK126213-1|BAC86488.1| 262|Homo sapiens protein ( Homo sapiens
cDNA FLJ44225 fis, clone THYMU3006168. ).
Length = 262
Score = 31.9 bits (69), Expect = 5.9
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = +3
Query: 297 THAYARAHARTCTCTYVCTNMRTHVLTH*QRPPATQPHT*CRVHAIISGFYKY*LINIAH 476
T+ Y HA C ++CT+M T+V ++ H +HA Y Y I I
Sbjct: 65 TYMYIHMHAYAYMCVFICTHMHTYVYSY----ARVCIHMYIHIHA-----YAYICIFIYT 115
Query: 477 NNFLYIYKY 503
+ Y+Y Y
Sbjct: 116 HMHTYVYSY 124
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,796,832
Number of Sequences: 237096
Number of extensions: 2411419
Number of successful extensions: 3358
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3270
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 21101516590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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