Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_G06_e335_14.seq
(1525 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1199 - 9657169-9657254,9657369-9657395,9657485-9657553,965... 171 2e-42
05_05_0300 + 23932947-23933196,23934022-23934123,23934249-239343... 168 1e-41
01_06_1103 - 34543915-34543955,34544069-34544137,34544294-345443... 163 4e-40
01_01_0981 + 7766025-7766753 31 1.8
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 31 2.4
11_06_0294 + 22022630-22024006,22024109-22024234,22024319-220244... 30 4.2
11_06_0278 - 21854859-21855101,21855529-21855587,21855684-218557... 30 4.2
09_02_0036 + 3217163-3217584,3217752-3218322 30 4.2
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 30 5.5
>01_01_1199 -
9657169-9657254,9657369-9657395,9657485-9657553,
9657922-9658023,9659895-9660000,9660145-9660165
Length = 136
Score = 171 bits (415), Expect = 2e-42
Identities = 78/107 (72%), Positives = 91/107 (85%)
Frame = +3
Query: 120 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEI 299
MVAAKK KK+ ++IN++L LVMKSGKY LGYK L+TLR KAKLVII+ N PPLRKSEI
Sbjct: 1 MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEI 60
Query: 300 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITT 440
EYYA+LAK VHH+ GNN++LGTACGKY+RVC L+I DPGDSDII T
Sbjct: 61 EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKT 107
>05_05_0300 +
23932947-23933196,23934022-23934123,23934249-23934317,
23934406-23934446
Length = 153
Score = 168 bits (408), Expect = 1e-41
Identities = 75/108 (69%), Positives = 87/108 (80%)
Frame = +3
Query: 123 VAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIE 302
V A QKK+ ++IN++L LVMKSGKY LGYK LKTLR K KL+I+A N PPLRKSEIE
Sbjct: 43 VVAMMQKKSTDNINNKLQLVMKSGKYTLGYKTVLKTLRNSKGKLIILANNCPPLRKSEIE 102
Query: 303 YYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLP 446
YYA+L K VHH+ GNN++LGTACGKYYRVC L+I DPGDSDII T P
Sbjct: 103 YYAMLGKVSVHHFHGNNVDLGTACGKYYRVCCLSIIDPGDSDIINTTP 150
>01_06_1103 -
34543915-34543955,34544069-34544137,34544294-34544395,
34545603-34545708,34545998-34546079,34546850-34547142
Length = 230
Score = 163 bits (395), Expect = 4e-40
Identities = 72/104 (69%), Positives = 84/104 (80%)
Frame = +3
Query: 141 KKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLA 320
KK E IN++L LVMKSGKY LGYK LKTLR K KLVI+A N PPLRKSEIEYYA+L
Sbjct: 126 KKNAEGINNKLQLVMKSGKYTLGYKTVLKTLRNSKGKLVIVANNCPPLRKSEIEYYAMLG 185
Query: 321 KTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEA 452
K V+H++GNN++LGTACGKYYRVC L++ DPGDSDI LPE+
Sbjct: 186 KVSVYHFNGNNVDLGTACGKYYRVCCLSVVDPGDSDITKQLPES 229
>01_01_0981 + 7766025-7766753
Length = 242
Score = 31.5 bits (68), Expect = 1.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 354 YCFHCSGGHLFWLGEHNILSPTSSEEA 274
+C HC H W G H+I+ P + + A
Sbjct: 40 FCSHCCSSHHLWPGHHHIVVPVTVDAA 66
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 31.1 bits (67), Expect = 2.4
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 6/115 (5%)
Frame = +3
Query: 105 KTAIIMVAAKKQKKTIESINSRLALVMKSGKY-CL--GYKQTLKTLRQGKAKLVIIARNA 275
KT + + K + L LV ++ + CL G K+ +K++R+G+ L IIA N
Sbjct: 11 KTPVALAPIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGQKGLCIIAGNI 70
Query: 276 PPLRKSEIEYYALLAKTG--VHHYSGNNIELGTA-CGKYYRVCTLAITDPGDSDI 431
P+ I + +L + + Y + +L TA K C L +T P ++
Sbjct: 71 SPI--DVITHVPILCEEANIPYVYVPSKEDLATAGTTKRPTCCVLVLTKPAKGEL 123
>11_06_0294 +
22022630-22024006,22024109-22024234,22024319-22024423,
22024525-22024659,22024798-22024847,22026487-22026545,
22026819-22026928,22027941-22028174,22028278-22028377,
22028699-22028829,22029834-22029914,22029970-22030128
Length = 888
Score = 30.3 bits (65), Expect = 4.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 607 LNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWQIVSVNILLKFAL 750
L+R + PF SW N +A D+ + L LNG + + LK L
Sbjct: 399 LSRPSRQDPFTSWDNMRQACLDKGTHALGKLNGRAAALIEKVNLKRGL 446
>11_06_0278 -
21854859-21855101,21855529-21855587,21855684-21855711,
21855812-21856702,21856792-21857011,21857638-21857687,
21863174-21863284,21863379-21863483,21863568-21863693,
21863796-21865187
Length = 1074
Score = 30.3 bits (65), Expect = 4.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 607 LNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWQIVSVNILLKFAL 750
L+R + PF SW N +A D+ + L LNG + + LK L
Sbjct: 404 LSRPSRQDPFTSWDNMRQACLDKGTHALGKLNGRAAALIEKVNLKRGL 451
>09_02_0036 + 3217163-3217584,3217752-3218322
Length = 330
Score = 30.3 bits (65), Expect = 4.2
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 545 ITIHWPSFYNVV-TGKTLALPNLIALQH 625
I+ W F N+V +G TL++PN + LQH
Sbjct: 69 ISAGWSRFINLVQSGPTLSIPNYVLLQH 96
>08_02_1073 - 24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 29.9 bits (64), Expect = 5.5
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +2
Query: 173 GSGYEVWQILLGLQTNFEDTQTRES*VGDHRQECASSEEVGDRILCSPSQNRCPPLQWK 349
G YE+ I LG + DT+T + GD E SSE ++ PS+ R W+
Sbjct: 993 GKIYEMMTIALGGRWGRSDTETEAATTGDASTETGSSEATVTEVI-EPSEVRPESDPWR 1050
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,757,888
Number of Sequences: 37544
Number of extensions: 675314
Number of successful extensions: 1514
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1514
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4896089576
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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