Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_G05_e327_13.seq
         (1516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    27   0.48 
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   3.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   4.5  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   7.8  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 26.6 bits (56), Expect = 0.48
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -1

Query: 544 FFFFCYEMDFIVIIPYIKLHKVRARPLVCKGIET-LVLVNAFW 419
           FFFF    DFI +I    +H  R R +  K     LV+ NAF+
Sbjct: 75  FFFFAICCDFIALIVVNIVHVFRKRRVNYKDSNIGLVVANAFF 117


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 678 PLSPAGVIAKRPAPIALPNSCA 743
           P  P GV  KR  P AL  +CA
Sbjct: 52  PCPPQGVDLKRVLPEALQTNCA 73


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -2

Query: 240 RYILWTPERDS*RNQIPKFLILTGLFSGISLMDTIS 133
           R++ + PE     N   +FL  TG    ISL+D IS
Sbjct: 497 RFLFYKPEDIFRPNTYNRFLAATGGDHVISLIDEIS 532


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = -2

Query: 990 WSRXGHRPXDGFSPFDVESPXFNXG 916
           W+  G +P  G+ P+D     +  G
Sbjct: 55  WTSAGLQPTTGYYPYDPALAAYGYG 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 285,585
Number of Sequences: 336
Number of extensions: 6121
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45476700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)