Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_G04_e319_14.seq
(1562 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B49AB Cluster: PREDICTED: similar to alpha-5 ty... 345 1e-93
UniRef50_P29400 Cluster: Collagen alpha-5(IV) chain precursor; n... 326 7e-88
UniRef50_P17139-2 Cluster: Isoform b of P17139 ; n=2; Caenorhabd... 310 9e-83
UniRef50_Q07265 Cluster: 3 alpha procollagen; n=4; Strongylocent... 309 1e-82
UniRef50_Q4SZ69 Cluster: Chromosome undetermined SCAF11805, whol... 217 4e-81
UniRef50_Q9VMV5 Cluster: CG16858-PA; n=6; Schizophora|Rep: CG168... 301 2e-80
UniRef50_Q7PVR6 Cluster: ENSANGP00000016652; n=3; Endopterygota|... 295 2e-78
UniRef50_Q01955 Cluster: Collagen alpha-3(IV) chain precursor (G... 292 2e-77
UniRef50_Q28084 Cluster: Collagen alpha-3(IV) chain; n=13; cellu... 292 2e-77
UniRef50_Q26640 Cluster: Alpha2(IV)-like collagen; n=4; Strongyl... 283 1e-74
UniRef50_Q4SZ73 Cluster: Chromosome undetermined SCAF11805, whol... 277 8e-73
UniRef50_Q9GQB1 Cluster: Type IV collagen alpha 1 chain precurso... 266 1e-69
UniRef50_UPI0000613E3C Cluster: Collagen alpha-2(IV) chain; n=2;... 265 2e-69
UniRef50_P08572 Cluster: Collagen alpha-2(IV) chain precursor [C... 263 1e-68
UniRef50_Q58FS7 Cluster: Type IV collagen alpha 3 chain; n=2; Da... 261 3e-68
UniRef50_UPI00006608B5 Cluster: Homolog of Homo sapiens "Tumstat... 255 2e-66
UniRef50_UPI0000DB7985 Cluster: PREDICTED: similar to Collagen t... 254 4e-66
UniRef50_P08120 Cluster: Collagen alpha-1(IV) chain precursor; n... 253 8e-66
UniRef50_P55787 Cluster: Collagen alpha-4(IV) chain; n=46; Eumet... 252 1e-65
UniRef50_Q4S0I4 Cluster: Chromosome 2 SCAF14781, whole genome sh... 250 1e-64
UniRef50_UPI000065E566 Cluster: Homolog of Homo sapiens "Splice ... 248 2e-64
UniRef50_P53420 Cluster: Collagen alpha-4(IV) chain precursor; n... 247 5e-64
UniRef50_UPI000065E567 Cluster: Homolog of Brachydanio rerio "Co... 241 5e-62
UniRef50_UPI00015A592A Cluster: Type IV collagen alpha 4 chain; ... 236 1e-60
UniRef50_Q4TZW9 Cluster: Type IV collagen alpha 4 chain; n=3; Da... 236 1e-60
UniRef50_O09238 Cluster: Collagen type IV; n=2; Pseudocorticium ... 221 5e-56
UniRef50_UPI0000DBF028 Cluster: UPI0000DBF028 related cluster; n... 182 3e-44
UniRef50_Q5C3P1 Cluster: SJCHGC06113 protein; n=2; Platyhelminth... 177 6e-43
UniRef50_UPI0000DA44CD Cluster: PREDICTED: similar to procollage... 153 2e-35
UniRef50_Q4SB07 Cluster: Chromosome undetermined SCAF14677, whol... 117 1e-24
UniRef50_A7T3G2 Cluster: Predicted protein; n=1; Nematostella ve... 100 9e-20
UniRef50_A7T795 Cluster: Predicted protein; n=1; Nematostella ve... 99 3e-19
UniRef50_Q5BYE6 Cluster: SJCHGC08138 protein; n=1; Schistosoma j... 98 6e-19
UniRef50_UPI000155E4F1 Cluster: PREDICTED: similar to alpha3 typ... 57 1e-06
UniRef50_A7SF77 Cluster: Predicted protein; n=1; Nematostella ve... 36 2.9
UniRef50_UPI000023D35B Cluster: hypothetical protein FG08200.1; ... 36 3.8
UniRef50_UPI0000DB7911 Cluster: PREDICTED: similar to CG12950-PA... 34 8.8
>UniRef50_UPI00015B49AB Cluster: PREDICTED: similar to alpha-5 type IV
collagen; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to alpha-5 type IV collagen - Nasonia vitripennis
Length = 1702
Score = 345 bits (849), Expect = 1e-93
Identities = 147/226 (65%), Positives = 176/226 (77%), Gaps = 1/226 (0%)
Frame = +1
Query: 184 KSRGFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMP 363
K+RGFYF HSQ+ +IP CP T +W+GFSL+H++ N AH QDLG PGSCL+KFS MP
Sbjct: 1371 KNRGFYFARHSQSAMIPVCPRNTVKMWDGFSLLHVMGNSYAHAQDLGTPGSCLKKFSVMP 1430
Query: 364 YMFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVH 543
+ CNLNNVCD+A R DYS+WLS+ E MPM+MTPI +R+VG YISRC VCEAPTR I +H
Sbjct: 1431 FNVCNLNNVCDYANRNDYSYWLSSNEQMPMSMTPIPSREVGAYISRCSVCEAPTRLIVMH 1490
Query: 544 SQSNTVPTCPNGWEELWIGYSFLMH-TAGADASGQSLISPGSCLREFRNRPFIECNGLGR 720
SQS +P CP GWEELW GYSFLMH AGA GQ L SPGSCL EFR RPFIEC G G
Sbjct: 1491 SQSMAIPECPGGWEELWAGYSFLMHRDAGAAGGGQPLSSPGSCLEEFRARPFIECRGQGT 1550
Query: 721 CNYFATAVSYWXSTIDDNKMFLKPEQKTLKADRVTKVSRCAVCMRQ 858
CN+F+TAVSYW +TI D + F KP+Q+TLK D ++VSRC+VC+R+
Sbjct: 1551 CNFFSTAVSYWMATIKDYEQFRKPQQQTLKTDHTSRVSRCSVCIRR 1596
>UniRef50_P29400 Cluster: Collagen alpha-5(IV) chain precursor; n=61;
Eumetazoa|Rep: Collagen alpha-5(IV) chain precursor -
Homo sapiens (Human)
Length = 1685
Score = 326 bits (802), Expect = 7e-88
Identities = 139/226 (61%), Positives = 177/226 (78%), Gaps = 2/226 (0%)
Frame = +1
Query: 187 SRGFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPY 366
+ GF T HSQT PQCP GT ++EGFSL+++ N +AHGQDLG GSCLR+FSTMP+
Sbjct: 1459 AHGFLITRHSQTTDAPQCPQGTLQVYEGFSLLYVQGNKRAHGQDLGTAGSCLRRFSTMPF 1518
Query: 367 MFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHS 546
MFCN+NNVC+FA R DYS+WLSTPEPMPM+M P++ + + +ISRC VCEAP IAVHS
Sbjct: 1519 MFCNINNVCNFASRNDYSYWLSTPEPMPMSMQPLKGQSIQPFISRCAVCEAPAVVIAVHS 1578
Query: 547 QSNTVPTCPNGWEELWIGYSFLMHT-AGADASGQSLISPGSCLREFRNRPFIECNGLGRC 723
Q+ +P CP GW+ LWIGYSF+MHT AGA+ SGQ+L SPGSCL EFR+ PFIEC+G G C
Sbjct: 1579 QTIQIPHCPQGWDSLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTC 1638
Query: 724 NYFATAVSYWXSTIDDNKMFLKPEQKTLKA-DRVTKVSRCAVCMRQ 858
NY+A + S+W +T+D + MF KP+ +TLKA D T++SRC VCM++
Sbjct: 1639 NYYANSYSFWLATVDVSDMFSKPQSETLKAGDLRTRISRCQVCMKR 1684
>UniRef50_P17139-2 Cluster: Isoform b of P17139 ; n=2; Caenorhabditis
elegans|Rep: Isoform b of P17139 - Caenorhabditis elegans
Length = 1502
Score = 310 bits (760), Expect = 9e-83
Identities = 135/225 (60%), Positives = 164/225 (72%), Gaps = 2/225 (0%)
Frame = +1
Query: 187 SRGFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPY 366
SRGF F HSQT +PQCP G S LWEG+SL+++ NG+A GQDLG PGSCL KF+TMP+
Sbjct: 1276 SRGFTFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPF 1335
Query: 367 MFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHS 546
MFCN+N+VC + R DYSFWLST EPM M P+ + YISRC VCE PT+ IAVHS
Sbjct: 1336 MFCNMNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHS 1395
Query: 547 QSNTVPTCPNGWEELWIGYSFLMHT-AGADASGQSLISPGSCLREFRNRPFIECNGLGRC 723
Q +VP CP GW +W GYSF+MHT AGA+ +GQSL SPGSCL EFR PFIEC+G G C
Sbjct: 1396 QDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGRGTC 1455
Query: 724 NYFATAVSYWXSTIDDNKMFLKPEQKTLKADRV-TKVSRCAVCMR 855
NY+AT +W S +D +K F KP +TLKA + +VSRC VC++
Sbjct: 1456 NYYATNHGFWPSIVDQDKQFRKPMSQTLKAGGLKDRVSRCQVCLK 1500
>UniRef50_Q07265 Cluster: 3 alpha procollagen; n=4; Strongylocentrotus
purpuratus|Rep: 3 alpha procollagen - Strongylocentrotus
purpuratus (Purple sea urchin)
Length = 1752
Score = 309 bits (759), Expect = 1e-82
Identities = 131/225 (58%), Positives = 167/225 (74%), Gaps = 2/225 (0%)
Frame = +1
Query: 187 SRGFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPY 366
S GF+ T HSQT IPQCP GT+ +W G+SL+ + N + HGQDLG PGSCL++FSTMP+
Sbjct: 1526 SSGFFITRHSQTTSIPQCPQGTAKMWHGYSLLFVQGNERGHGQDLGKPGSCLKRFSTMPF 1585
Query: 367 MFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHS 546
+FCN+NNVC A R DYS+WLST EPMPM M PI+ + +ISRC VCEAP + + VHS
Sbjct: 1586 LFCNINNVCHVASRNDYSYWLSTTEPMPMNMAPIRGGQLQPFISRCVVCEAPAQVLTVHS 1645
Query: 547 QSNTVPTCPNGWEELWIGYSFLMHTA-GADASGQSLISPGSCLREFRNRPFIECNGLGRC 723
Q+ +P CP+ W LWIGYSF+MHT G + SGQ L SPGSCL +FR+ PFIEC+G G+C
Sbjct: 1646 QTVNIPDCPDRWGVLWIGYSFMMHTGPGGEGSGQMLSSPGSCLEDFRSSPFIECHGDGKC 1705
Query: 724 NYFATAVSYWXSTIDDNKMFLKPEQKTLKADRV-TKVSRCAVCMR 855
NY+AT ++W S+I N F P+ +TLKA + T+VSRCAVC+R
Sbjct: 1706 NYYATTYTFWLSSITGNAQFTMPQSETLKAGSLRTRVSRCAVCLR 1750
>UniRef50_Q4SZ69 Cluster: Chromosome undetermined SCAF11805, whole
genome shotgun sequence; n=2; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF11805,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 471
Score = 217 bits (529), Expect(2) = 4e-81
Identities = 88/143 (61%), Positives = 111/143 (77%)
Frame = +1
Query: 187 SRGFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPY 366
+ GF T HSQ + +P CP GT+ +++G+SL+++ N +AHGQDLG GSCLR+FSTMP+
Sbjct: 205 AHGFLITRHSQAQDVPYCPDGTNLIYDGYSLLYVQGNERAHGQDLGTAGSCLRRFSTMPF 264
Query: 367 MFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHS 546
MFCN+NNVC+FA R DYS+WLSTPEPMPM+M PI + +ISRC VCEAP IAVHS
Sbjct: 265 MFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGESIKPFISRCAVCEAPAMVIAVHS 324
Query: 547 QSNTVPTCPNGWEELWIGYSFLM 615
Q+ +PTCP WE LWIGYSF+M
Sbjct: 325 QTIQIPTCPANWEALWIGYSFMM 347
Score = 109 bits (263), Expect(2) = 4e-81
Identities = 47/83 (56%), Positives = 65/83 (78%), Gaps = 2/83 (2%)
Frame = +1
Query: 616 HT-AGADASGQSLISPGSCLREFRNRPFIECNGLGRCNYFATAVSYWXSTIDDNKMFLKP 792
HT AGA+ SGQ+L SPGSCL EFR+ PFIEC+G G CNY+ + S+W +T++ ++MF KP
Sbjct: 388 HTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYGNSYSFWLATVEPSEMFRKP 447
Query: 793 EQKTLKADRV-TKVSRCAVCMRQ 858
+ +TLKA + T+VSRC VCM++
Sbjct: 448 QSETLKAGNLQTRVSRCVVCMKR 470
Score = 73.7 bits (173), Expect = 1e-11
Identities = 42/108 (38%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Frame = +1
Query: 532 IAVHSQSNTVPTCPNGWEELWIGYSFLMHTAGADASGQSLISPGSCLREFRNRPFIECNG 711
I HSQ+ VP CP+G ++ GYS L A GQ L + GSCLR F PF+ CN
Sbjct: 210 ITRHSQAQDVPYCPDGTNLIYDGYSLLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFCNI 269
Query: 712 LGRCNYFA-TAVSYWXSTIDDNKMFLKPEQKTLKADRVTK-VSRCAVC 849
CN+ + SYW ST + M + P + + + +SRCAVC
Sbjct: 270 NNVCNFASRNDYSYWLSTPEPMPMSMAP----ITGESIKPFISRCAVC 313
Score = 64.1 bits (149), Expect = 1e-08
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Frame = +1
Query: 283 HIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLNNVCDFAQREDYSFWLSTPEPMPMAMT 462
H A + GQ L +PGSCL +F + P++ C+ C++ YSFWL+T EP M
Sbjct: 388 HTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNY-YGNSYSFWLATVEPSEMFRK 446
Query: 463 P----IQARDVGTYISRCQVC 513
P ++A ++ T +SRC VC
Sbjct: 447 PQSETLKAGNLQTRVSRCVVC 467
Score = 35.9 bits (79), Expect = 2.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 208 IHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQ 315
+HSQT IP CPA +LW G+S + + + H Q
Sbjct: 322 VHSQTIQIPTCPANWEALWIGYSFMMVGRDTHTHIQ 357
>UniRef50_Q9VMV5 Cluster: CG16858-PA; n=6; Schizophora|Rep: CG16858-PA
- Drosophila melanogaster (Fruit fly)
Length = 1940
Score = 301 bits (740), Expect = 2e-80
Identities = 132/226 (58%), Positives = 163/226 (72%), Gaps = 1/226 (0%)
Frame = +1
Query: 184 KSRGFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMP 363
KSRGF F HSQ+ +PQCPA T+ LWEG+SL VA +A GQDLG GSC+ +F+TMP
Sbjct: 1512 KSRGFIFARHSQSVHVPQCPANTNLLWEGYSLSGNVAASRAVGQDLGQSGSCMMRFTTMP 1571
Query: 364 YMFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVH 543
YM C++ NVC FAQ D S WLST EPMPM MTPIQ RD+ YISRC VCE TR IA+H
Sbjct: 1572 YMLCDITNVCHFAQNNDDSLWLSTAEPMPMTMTPIQGRDLMKYISRCVVCETTTRIIALH 1631
Query: 544 SQSNTVPTCPNGWEELWIGYSFLMHTA-GADASGQSLISPGSCLREFRNRPFIECNGLGR 720
SQS ++P CP GWEE+W GYS+ M T GQ+L+SPGSCL EFR +P IEC+G GR
Sbjct: 1632 SQSMSIPDCPGGWEEMWTGYSYFMSTLDNVGGVGQNLVSPGSCLEEFRAQPVIECHGHGR 1691
Query: 721 CNYFATAVSYWXSTIDDNKMFLKPEQKTLKADRVTKVSRCAVCMRQ 858
CNY+ S+W + I++ F++P Q+TLKAD +K+SRC VC R+
Sbjct: 1692 CNYYDALASFWLTVIEEQDQFVQPRQQTLKADFTSKISRCTVCRRR 1737
>UniRef50_Q7PVR6 Cluster: ENSANGP00000016652; n=3;
Endopterygota|Rep: ENSANGP00000016652 - Anopheles
gambiae str. PEST
Length = 461
Score = 295 bits (724), Expect = 2e-78
Identities = 123/226 (54%), Positives = 167/226 (73%), Gaps = 1/226 (0%)
Frame = +1
Query: 184 KSRGFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMP 363
K+ G+ F HSQ IP+CP T LW+G+SL++++A+ ++ GQDLGA GSCLR+FSTMP
Sbjct: 181 KNLGYLFARHSQKVTIPECPINTYKLWDGYSLVNVIASSRSVGQDLGAAGSCLRRFSTMP 240
Query: 364 YMFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVH 543
+MFC++NNVC++A D + WL+TPEPMPM+M PI A V YISRC VCE+ TR +A+H
Sbjct: 241 FMFCDINNVCNYASNNDDTIWLATPEPMPMSMAPIPADQVERYISRCSVCESNTRVMALH 300
Query: 544 SQSNTVPTCPNGWEELWIGYSFLMHTA-GADASGQSLISPGSCLREFRNRPFIECNGLGR 720
SQS ++P CP GWEELW+GYS+ MHT+ + GQ +SPGSC+ EFR +P IEC+G G
Sbjct: 301 SQSMSIPDCPEGWEELWLGYSYAMHTSDNSGGFGQDFVSPGSCMEEFRPQPVIECHGHGT 360
Query: 721 CNYFATAVSYWXSTIDDNKMFLKPEQKTLKADRVTKVSRCAVCMRQ 858
CN++ S+W + IDD F +P+ +TLKA + +KVSRC VC R+
Sbjct: 361 CNFYDGISSFWLTIIDDAMQFNRPQPQTLKAHQTSKVSRCIVCRRK 406
>UniRef50_Q01955 Cluster: Collagen alpha-3(IV) chain precursor
(Goodpasture antigen) [Contains: Tumstatin]; n=61;
Eumetazoa|Rep: Collagen alpha-3(IV) chain precursor
(Goodpasture antigen) [Contains: Tumstatin] - Homo
sapiens (Human)
Length = 1670
Score = 292 bits (716), Expect = 2e-77
Identities = 125/226 (55%), Positives = 165/226 (73%), Gaps = 2/226 (0%)
Frame = +1
Query: 187 SRGFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPY 366
+RGF FT HSQT IP CP GT L+ GFS + + N +AHGQDLG GSCL++F+TMP+
Sbjct: 1443 TRGFVFTRHSQTTAIPSCPEGTVPLYSGFSFLFVQGNQRAHGQDLGTLGSCLQRFTTMPF 1502
Query: 367 MFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHS 546
+FCN+N+VC+FA R DYS+WLSTP MPM M PI R + YISRC VCE P IAVHS
Sbjct: 1503 LFCNVNDVCNFASRNDYSYWLSTPALMPMNMAPITGRALEPYISRCTVCEGPAIAIAVHS 1562
Query: 547 QSNTVPTCPNGWEELWIGYSFLMHT-AGADASGQSLISPGSCLREFRNRPFIECNGLGRC 723
Q+ +P CP+GW LW G+SF+M T AG++ +GQ+L SPGSCL EFR PF+EC+G G C
Sbjct: 1563 QTTDIPPCPHGWISLWKGFSFIMFTSAGSEGTGQALASPGSCLEEFRASPFLECHGRGTC 1622
Query: 724 NYFATAVSYWXSTIDDNKMFLKPEQKTLKADRVTK-VSRCAVCMRQ 858
NY++ + S+W ++++ +MF KP T+KA + K +SRC VCM++
Sbjct: 1623 NYYSNSYSFWLASLNPERMFRKPIPSTVKAGELEKIISRCQVCMKK 1668
>UniRef50_Q28084 Cluster: Collagen alpha-3(IV) chain; n=13; cellular
organisms|Rep: Collagen alpha-3(IV) chain - Bos taurus
(Bovine)
Length = 471
Score = 292 bits (716), Expect = 2e-77
Identities = 126/224 (56%), Positives = 162/224 (72%), Gaps = 2/224 (0%)
Frame = +1
Query: 190 RGFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYM 369
RGF FT HSQT IP CP GT L+ GFSL+ + N +AHGQDLG GSCL++F+TMP++
Sbjct: 245 RGFVFTRHSQTTAIPSCPEGTEPLYSGFSLLFVQGNEQAHGQDLGTLGSCLQRFTTMPFL 304
Query: 370 FCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQ 549
FCN+N+VC+FA R DYS+WLSTP +PM M PI R + YISRC VCE P IAVHSQ
Sbjct: 305 FCNINDVCNFASRNDYSYWLSTPAMIPMDMAPITGRALEPYISRCTVCEGPAIAIAVHSQ 364
Query: 550 SNTVPTCPNGWEELWIGYSFLMHT-AGADASGQSLISPGSCLREFRNRPFIECNGLGRCN 726
+ +P CP GW LW G+SF+M T AG++ +GQ+L SPGSCL EFR PFIEC+G G CN
Sbjct: 365 TTDIPPCPAGWISLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGRGTCN 424
Query: 727 YFATAVSYWXSTIDDNKMFLKPEQKTLKADRVTK-VSRCAVCMR 855
Y++ + S+W +++D +MF KP T+KA + +SRC VCM+
Sbjct: 425 YYSNSYSFWLASLDPKRMFRKPIPSTVKAGELENIISRCQVCMK 468
>UniRef50_Q26640 Cluster: Alpha2(IV)-like collagen; n=4;
Strongylocentrotus purpuratus|Rep: Alpha2(IV)-like
collagen - Strongylocentrotus purpuratus (Purple sea
urchin)
Length = 1747
Score = 283 bits (693), Expect = 1e-74
Identities = 118/224 (52%), Positives = 159/224 (70%), Gaps = 1/224 (0%)
Frame = +1
Query: 187 SRGFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPY 366
+RG + T HSQ+R +P CPAGT LW GFS++ + NG AH QDLG GSCL++FSTMP+
Sbjct: 1524 NRGHFITRHSQSRNVPSCPAGTVELWRGFSVLFSMGNGHAHHQDLGDAGSCLQRFSTMPF 1583
Query: 367 MFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHS 546
+FCN NNVC++A R D S+WL+T EP+PM P+ + + YISRC VCEAPT+++A+HS
Sbjct: 1584 LFCNFNNVCNYASRNDRSYWLTTNEPLPMM--PLMNQQIDPYISRCTVCEAPTQSLAIHS 1641
Query: 547 QSNTVPTCPNGWEELWIGYSFLMHTAGADASGQSLISPGSCLREFRNRPFIECNGLGRCN 726
QS +P CP GW LW GYSF M+TA ++ GQ L S GSCL FR PFIECNG G C+
Sbjct: 1642 QSQEIPQCPGGWRSLWTGYSFTMYTAASEGGGQGLESVGSCLENFRATPFIECNGRGNCH 1701
Query: 727 YFATAVSYWXSTIDDNKMFLKPEQKTLKADRV-TKVSRCAVCMR 855
+F+ S+W + ID+ F P ++T+K+ ++ + VSRC VC +
Sbjct: 1702 FFSNEYSFWLTVIDEEDQFAIPRKRTIKSGQLQSVVSRCRVCQK 1745
>UniRef50_Q4SZ73 Cluster: Chromosome undetermined SCAF11805, whole
genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome undetermined SCAF11805, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1026
Score = 277 bits (678), Expect = 8e-73
Identities = 123/227 (54%), Positives = 158/227 (69%), Gaps = 4/227 (1%)
Frame = +1
Query: 187 SRGFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPY 366
S G+ HSQ +P CP G + LW+G+SL+++ KAH QDLG PGSCL +FST+P+
Sbjct: 802 SIGYTLVKHSQDAQVPMCPQGMAKLWDGYSLLYVEGQEKAHNQDLGQPGSCLPRFSTIPF 861
Query: 367 MFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHS 546
++C+ N VC +A R D S+WLST +P M P+ + YISRC VCEAP++ +AVHS
Sbjct: 862 LYCSPNEVCYYASRNDKSYWLSTTASIP--MMPVAEAQIQAYISRCSVCEAPSQAVAVHS 919
Query: 547 QSNTVPTCPNGWEELWIGYSFLMHT-AGADASGQSLISPGSCLREFRNRPFIECNGL-GR 720
Q T+PTCP GW LWIGYSFLMHT AGA+ GQSL+SPGSCL +FR PFIECNG G
Sbjct: 920 QDMTIPTCPPGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGAKGT 979
Query: 721 CNYFATAVSYWXSTIDDN-KMFLKPEQKTLKADRV-TKVSRCAVCMR 855
C+YFA S+W +T+D N + F P Q+TLK + +KVSRC VC +
Sbjct: 980 CHYFANKYSFWLTTVDPNQEFFYSPSQETLKGGQERSKVSRCQVCSK 1026
>UniRef50_Q9GQB1 Cluster: Type IV collagen alpha 1 chain precursor;
n=1; Hydra vulgaris|Rep: Type IV collagen alpha 1 chain
precursor - Hydra attenuata (Hydra) (Hydra vulgaris)
Length = 1723
Score = 266 bits (652), Expect = 1e-69
Identities = 118/222 (53%), Positives = 153/222 (68%), Gaps = 1/222 (0%)
Frame = +1
Query: 193 GFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMF 372
GFY HSQ+ +P CPAG ++WEG+S ++ N +A GQDLG PGSCL++FSTMP++F
Sbjct: 1501 GFYLVKHSQSIKVPSCPAGMQTMWEGYSFLYAQGNERAFGQDLGQPGSCLKRFSTMPFLF 1560
Query: 373 CNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQS 552
C++ N C A R DYSFWLST E A P D+ YISRC VCEAP+ +AVHSQS
Sbjct: 1561 CDIQNKCVVASRNDYSFWLSTAEKPKEA--PSSGADLENYISRCIVCEAPSHVLAVHSQS 1618
Query: 553 NTVPTCPNGWEELWIGYSFLMH-TAGADASGQSLISPGSCLREFRNRPFIECNGLGRCNY 729
P CP+GWE LW G+SFLM+ +AGA SGQ L S GSCL +FR P+IEC+G G C Y
Sbjct: 1619 ELDPKCPDGWENLWTGFSFLMYNSAGAQGSGQLLSSSGSCLEDFRVNPYIECHGRGTCWY 1678
Query: 730 FATAVSYWXSTIDDNKMFLKPEQKTLKADRVTKVSRCAVCMR 855
+ +S+W STI ++ MF P+ + L+ + +VSRCAVCM+
Sbjct: 1679 YGPTLSFWLSTIGESNMFQVPKFEILERNLKARVSRCAVCMK 1720
>UniRef50_UPI0000613E3C Cluster: Collagen alpha-2(IV) chain; n=2;
Bos taurus|Rep: Collagen alpha-2(IV) chain - Bos Taurus
Length = 227
Score = 265 bits (650), Expect = 2e-69
Identities = 121/226 (53%), Positives = 149/226 (65%), Gaps = 3/226 (1%)
Frame = +1
Query: 187 SRGFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPY 366
S G+ HSQT P CP G + LW G+SL++ KAH QDLG GSCL +FSTMP+
Sbjct: 2 SIGYLLVKHSQTDKEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPF 61
Query: 367 MFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHS 546
++CN +VC +A R D S+WLST P+P M P+ D+ YISRC VCEAP IAVHS
Sbjct: 62 LYCNPGDVCYYASRNDKSYWLSTTAPLP--MMPVAEEDIRPYISRCSVCEAPAVAIAVHS 119
Query: 547 QSNTVPTCPNGWEELWIGYSFLMHT-AGADASGQSLISPGSCLREFRNRPFIECNGL-GR 720
Q ++P CP GW LWIGYSFLMHT AG + GQSL+SPGSCL +FR PFIECNG G
Sbjct: 120 QDVSIPHCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGT 179
Query: 721 CNYFATAVSYWXSTIDDNKMFLKPEQKTLKADRV-TKVSRCAVCMR 855
C+Y+A S+W +TI + P TLKA + T +SRC VCM+
Sbjct: 180 CHYYANKYSFWLTTIPEQSFQGTPSADTLKAGLIRTHISRCQVCMK 225
>UniRef50_P08572 Cluster: Collagen alpha-2(IV) chain precursor
[Contains: Canstatin]; n=48; Tetrapoda|Rep: Collagen
alpha-2(IV) chain precursor [Contains: Canstatin] - Homo
sapiens (Human)
Length = 1712
Score = 263 bits (644), Expect = 1e-68
Identities = 120/226 (53%), Positives = 149/226 (65%), Gaps = 3/226 (1%)
Frame = +1
Query: 187 SRGFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPY 366
S G+ HSQT P CP G + LW G+SL++ KAH QDLG GSCL +FSTMP+
Sbjct: 1487 SIGYLLVKHSQTDQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPF 1546
Query: 367 MFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHS 546
++CN +VC +A R D S+WLST P+P M P+ ++ YISRC VCEAP IAVHS
Sbjct: 1547 LYCNPGDVCYYASRNDKSYWLSTTAPLP--MMPVAEDEIKPYISRCSVCEAPAIAIAVHS 1604
Query: 547 QSNTVPTCPNGWEELWIGYSFLMHT-AGADASGQSLISPGSCLREFRNRPFIECN-GLGR 720
Q ++P CP GW LWIGYSFLMHT AG + GQSL+SPGSCL +FR PFIECN G G
Sbjct: 1605 QDVSIPHCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGT 1664
Query: 721 CNYFATAVSYWXSTIDDNKMFLKPEQKTLKADRV-TKVSRCAVCMR 855
C+Y+A S+W +TI + P TLKA + T +SRC VCM+
Sbjct: 1665 CHYYANKYSFWLTTIPEQSFQGSPSADTLKAGLIRTHISRCQVCMK 1710
>UniRef50_Q58FS7 Cluster: Type IV collagen alpha 3 chain; n=2; Danio
rerio|Rep: Type IV collagen alpha 3 chain - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 244
Score = 261 bits (640), Expect = 3e-68
Identities = 116/226 (51%), Positives = 149/226 (65%), Gaps = 1/226 (0%)
Frame = +1
Query: 184 KSRGFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMP 363
K GF FT HSQT +IP+CPAG+ L+ G+SL+ I N + HGQDLG GSCL F+TMP
Sbjct: 14 KRDGFLFTRHSQTTVIPECPAGSKRLYTGYSLLFINGNNRGHGQDLGTLGSCLPMFNTMP 73
Query: 364 YMFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVH 543
+M CN + C +A R DYS+WLST PM + + YISRC VCEA IA+H
Sbjct: 74 FMVCNRDETCRYASRNDYSYWLSTDTPMLPDQQMMSGEILKWYISRCSVCEAIANVIAIH 133
Query: 544 SQSNTVPTCPNGWEELWIGYSFLMHT-AGADASGQSLISPGSCLREFRNRPFIECNGLGR 720
SQ+ +P CP GW LW GYSF+M T GA+ SGQ L+SPGSCL +FR PFIEC+G G
Sbjct: 134 SQTINIPQCPVGWLSLWEGYSFVMQTGVGAEGSGQPLVSPGSCLEQFRKIPFIECHGRGT 193
Query: 721 CNYFATAVSYWXSTIDDNKMFLKPEQKTLKADRVTKVSRCAVCMRQ 858
CN++ + SYW +++D MF P ++T K + +SRC VCM+Q
Sbjct: 194 CNFYPDSYSYWLASLDHTNMFSMPNRQTAKQKEI--ISRCQVCMKQ 237
>UniRef50_UPI00006608B5 Cluster: Homolog of Homo sapiens "Tumstatin;
n=1; Takifugu rubripes|Rep: Homolog of Homo sapiens
"Tumstatin - Takifugu rubripes
Length = 1374
Score = 255 bits (625), Expect = 2e-66
Identities = 113/223 (50%), Positives = 151/223 (67%), Gaps = 2/223 (0%)
Frame = +1
Query: 196 FYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFC 375
F FT HSQ IP+CP G++ ++ G+SL+ I N +AHGQDLG GSCL +F+TMP++FC
Sbjct: 1152 FLFTRHSQELSIPECPVGSTEVYSGYSLLFINGNNRAHGQDLGTLGSCLPRFTTMPFLFC 1211
Query: 376 NLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSN 555
N ++ C +A R DYS+WLST + + M I + +YISRC VCE T IA+HSQ++
Sbjct: 1212 NTDSTCRYASRNDYSYWLSTNQVVLSNMPLISGDLLRSYISRCSVCETRTNVIAIHSQTS 1271
Query: 556 TVPTCPNGWEELWIGYSFLMHT-AGADASGQSLISPGSCLREFRNRPFIECNGLGRCNYF 732
VP CP GW LW+GYSF+M T GA+ SGQ L SPGSCL +FR PFIEC+G G CNY+
Sbjct: 1272 VVPDCPLGWLPLWVGYSFVMETGVGAEGSGQPLASPGSCLEQFRKIPFIECHGRGTCNYY 1331
Query: 733 ATAVSYWXSTIDDNKMFLKPEQKTLKAD-RVTKVSRCAVCMRQ 858
+ SYW + + + MF KP+ T + + +SRC VCM+Q
Sbjct: 1332 TDSYSYWLAALSPHDMFSKPKPHTDTGEFPGSLISRCRVCMKQ 1374
Score = 85.0 bits (201), Expect = 5e-15
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Frame = +1
Query: 184 KSRGFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANG-KAHGQDLGAPGSCLRKFSTM 360
++R IHSQT ++P CP G LW G+S + G + GQ L +PGSCL +F +
Sbjct: 1258 ETRTNVIAIHSQTSVVPDCPLGWLPLWVGYSFVMETGVGAEGSGQPLASPGSCLEQFRKI 1317
Query: 361 PYMFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTY----ISRCQVC 513
P++ C+ C++ + YS+WL+ P M P D G + ISRC+VC
Sbjct: 1318 PFIECHGRGTCNY-YTDSYSYWLAALSPHDMFSKPKPHTDTGEFPGSLISRCRVC 1371
>UniRef50_UPI0000DB7985 Cluster: PREDICTED: similar to Collagen type
IV CG4145-PA, isoform A isoform 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to Collagen type IV
CG4145-PA, isoform A isoform 1 - Apis mellifera
Length = 1913
Score = 254 bits (623), Expect = 4e-66
Identities = 123/248 (49%), Positives = 158/248 (63%), Gaps = 27/248 (10%)
Frame = +1
Query: 193 GFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAP-------------- 330
G HSQ++L+P C AG LWEG+SL+ + +AH QDLG
Sbjct: 1666 GILLVKHSQSQLLPVCDAGHIKLWEGYSLLFTDGDERAHSQDLGKSETYIAIDSKFFPRF 1725
Query: 331 ----------GSCLRKFSTMPYMFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARD 480
GSC+RKFSTMP++FC++NNVC + R D S+WLST P+PM P+Q +
Sbjct: 1726 SYDLVPFRYAGSCVRKFSTMPFLFCDINNVCHYGNRGDRSYWLSTTSPIPMM--PVQESE 1783
Query: 481 VGTYISRCQVCEAPTRTIAVHSQSNTVPTCPNGWEELWIGYSFLMHT-AGADASGQSLIS 657
+ YISRC VCE P +AVHSQS +P CP GW LWIGYSFLMHT AGA GQSL S
Sbjct: 1784 IEQYISRCVVCEVPANVLAVHSQSLNIPDCPQGWTGLWIGYSFLMHTGAGAQGGGQSLSS 1843
Query: 658 PGSCLREFRNRPFIECNG-LGRCNYFATAVSYWXSTIDDNKMFLKPEQKTLKADRV-TKV 831
GSCL +FR PFIECNG G+C+Y+ +S+W +TI+D + F PEQ+TLKA + +K+
Sbjct: 1844 SGSCLEDFRATPFIECNGNKGQCHYYMNEISFWMATIEDRQQFQAPEQQTLKAGNLRSKI 1903
Query: 832 SRCAVCMR 855
SRC VC++
Sbjct: 1904 SRCQVCIK 1911
>UniRef50_P08120 Cluster: Collagen alpha-1(IV) chain precursor; n=5;
Diptera|Rep: Collagen alpha-1(IV) chain precursor -
Drosophila melanogaster (Fruit fly)
Length = 1775
Score = 253 bits (620), Expect = 8e-66
Identities = 116/224 (51%), Positives = 154/224 (68%), Gaps = 3/224 (1%)
Frame = +1
Query: 193 GFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMF 372
G T HSQ+ +P C AG + LW G+SL+++ N AH QDLG SC+ +FST+P +
Sbjct: 1554 GILITRHSQSETVPACSAGHTELWTGYSLLYVDGNDYAHNQDLG---SCVPRFSTLPVLS 1610
Query: 373 CNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQS 552
C NNVC++A R D +FWL+T +PM P++ ++ YISRC VCEAP IAVHSQ+
Sbjct: 1611 CGQNNVCNYASRNDKTFWLTTNAAIPMM--PVENIEIRQYISRCVVCEAPANVIAVHSQT 1668
Query: 553 NTVPTCPNGWEELWIGYSFLMHTA-GADASGQSLISPGSCLREFRNRPFIECNGL-GRCN 726
VP CPNGWE LWIGYSFLMHTA G GQ+L SPGSCL +FR PFIECNG G C+
Sbjct: 1669 IEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAKGTCH 1728
Query: 727 YFATAVSYWXSTIDDNKMFLKPEQKTLKA-DRVTKVSRCAVCMR 855
++ T S+W ++ ++ F +P+Q+T+KA +R + VSRC VCM+
Sbjct: 1729 FYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMK 1772
>UniRef50_P55787 Cluster: Collagen alpha-4(IV) chain; n=46;
Eumetazoa|Rep: Collagen alpha-4(IV) chain - Oryctolagus
cuniculus (Rabbit)
Length = 623
Score = 252 bits (618), Expect = 1e-65
Identities = 112/226 (49%), Positives = 149/226 (65%), Gaps = 5/226 (2%)
Frame = +1
Query: 193 GFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMF 372
GF +HSQT P CP G LW G+SL+++ KAH QDLG GSCL FST+P+ +
Sbjct: 398 GFLLVLHSQTDQEPACPMGMPRLWTGYSLLYLEGQEKAHNQDLGLAGSCLPIFSTLPFAY 457
Query: 373 CNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQS 552
CN++ VC +AQR D S+WL++ P+P M P+ ++ YISRC VCEAP + +AVHSQ
Sbjct: 458 CNIHQVCHYAQRNDKSYWLASAGPLP--MMPLSEEEIRPYISRCAVCEAPAQAVAVHSQD 515
Query: 553 NTVPTCPNGWEELWIGYSFLMHT-AGADASGQSLISPGSCLREFRNRPFIECNG-LGRCN 726
++P CP W LWIGYSFLMHT AG GQ+L+SPGSCL +FR PF+EC G G C+
Sbjct: 516 QSIPPCPRAWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLEDFRAAPFLECQGRQGTCH 575
Query: 727 YFATAVSYWXSTI-DDNKMFLKPEQKTLKADRV--TKVSRCAVCMR 855
+FA S+W +T+ D ++F P TLK + K+SRC VC++
Sbjct: 576 FFANEYSFWLTTVPPDLQVFSAPSPDTLKESQAQRQKISRCQVCVK 621
>UniRef50_Q4S0I4 Cluster: Chromosome 2 SCAF14781, whole genome shotgun
sequence; n=5; Euteleostomi|Rep: Chromosome 2 SCAF14781,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1468
Score = 250 bits (611), Expect = 1e-64
Identities = 110/196 (56%), Positives = 137/196 (69%), Gaps = 2/196 (1%)
Frame = +1
Query: 187 SRGFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPY 366
S G+ HSQT IP CP G + LW G+SL+++ KAH QDLG GSCL +FSTMP+
Sbjct: 1274 SVGYLLVKHSQTEQIPMCPVGMAKLWSGYSLLYMEGQEKAHNQDLGLAGSCLPRFSTMPF 1333
Query: 367 MFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHS 546
++CN ++C +A R D S+WLST P+P M P++ ++ YISRC VCEAP+ IAVHS
Sbjct: 1334 LYCNPGDICYYASRNDKSYWLSTTAPLP--MMPVEDVEIKPYISRCSVCEAPSVAIAVHS 1391
Query: 547 QSNTVPTCPNGWEELWIGYSFLMHT-AGADASGQSLISPGSCLREFRNRPFIECNGL-GR 720
Q T+P CP GW LWIGYSFLMHT AG + GQSL SPGSCL +FR PFIECNG G
Sbjct: 1392 QDITIPQCPVGWRSLWIGYSFLMHTAAGNEGGGQSLSSPGSCLEDFRTTPFIECNGAKGT 1451
Query: 721 CNYFATAVSYWXSTID 768
C+YFA S+W S++D
Sbjct: 1452 CHYFANKHSFWLSSVD 1467
>UniRef50_UPI000065E566 Cluster: Homolog of Homo sapiens "Splice
Isoform 1 of Collagen alpha 3; n=1; Takifugu
rubripes|Rep: Homolog of Homo sapiens "Splice Isoform 1
of Collagen alpha 3 - Takifugu rubripes
Length = 1258
Score = 248 bits (608), Expect = 2e-64
Identities = 112/221 (50%), Positives = 143/221 (64%), Gaps = 2/221 (0%)
Frame = +1
Query: 196 FYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFC 375
F HSQ+ IP CP GTS L+ G+S + + AN + HGQDLG PGSCL FSTMP++ C
Sbjct: 1038 FMIARHSQSIHIPVCPCGTSLLFSGYSFLFMHANDRVHGQDLGTPGSCLPHFSTMPFLVC 1097
Query: 376 NLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSN 555
+ + C +A R DYS+WLST + +P M I + +YISRC VCE + IAVHSQ+
Sbjct: 1098 DTESNCRYASRNDYSYWLSTGKALPENMVSITGDMLASYISRCAVCETTSNVIAVHSQTT 1157
Query: 556 TVPTCPNGWEELWIGYSFLMHTA-GADASGQSLISPGSCLREFRNRPFIECNGLGRCNYF 732
+P CP W LW GYSF+M T GAD S Q LISPGSCL FR PFIEC+G G CNY+
Sbjct: 1158 QIPDCPQDWVSLWSGYSFVMQTGIGADGSSQPLISPGSCLETFRKVPFIECHGRGTCNYY 1217
Query: 733 ATAVSYWXSTIDDNKMFLKPEQKTLKADRVTKV-SRCAVCM 852
+ S+W +++D MF KP +T+K + + SRC VCM
Sbjct: 1218 PDSYSFWMASLDPKNMFGKPIPQTVKEPSLQSILSRCRVCM 1258
>UniRef50_P53420 Cluster: Collagen alpha-4(IV) chain precursor; n=36;
Euteleostomi|Rep: Collagen alpha-4(IV) chain precursor -
Homo sapiens (Human)
Length = 1690
Score = 247 bits (605), Expect = 5e-64
Identities = 110/226 (48%), Positives = 146/226 (64%), Gaps = 5/226 (2%)
Frame = +1
Query: 193 GFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMF 372
GF +HSQT P CP G LW G+SL+++ KAH QDLG GSCL FST+P+ +
Sbjct: 1465 GFLLVLHSQTDQEPTCPLGMPRLWTGYSLLYLEGQEKAHNQDLGLAGSCLPVFSTLPFAY 1524
Query: 373 CNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQS 552
CN++ VC +AQR D S+WL++ P+P M P+ + Y+SRC VCEAP + +AVHSQ
Sbjct: 1525 CNIHQVCHYAQRNDRSYWLASAAPLP--MMPLSEEAIRPYVSRCAVCEAPAQAVAVHSQD 1582
Query: 553 NTVPTCPNGWEELWIGYSFLMHT-AGADASGQSLISPGSCLREFRNRPFIECNG-LGRCN 726
++P CP W LWIGYSFLMHT AG GQ+L+SPGSCL +FR PF+EC G G C+
Sbjct: 1583 QSIPPCPQTWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLEDFRAAPFLECQGRQGTCH 1642
Query: 727 YFATAVSYWXSTIDDNKMFLK-PEQKTLKADRV--TKVSRCAVCMR 855
+FA S+W +T+ + F P TLK + K+SRC VC++
Sbjct: 1643 FFANKYSFWLTTVKADLQFSSAPAPDTLKESQAQRQKISRCQVCVK 1688
>UniRef50_UPI000065E567 Cluster: Homolog of Brachydanio rerio
"Collagen, type I, alpha 3.; n=1; Takifugu rubripes|Rep:
Homolog of Brachydanio rerio "Collagen, type I, alpha 3.
- Takifugu rubripes
Length = 1426
Score = 241 bits (589), Expect = 5e-62
Identities = 111/225 (49%), Positives = 145/225 (64%), Gaps = 4/225 (1%)
Frame = +1
Query: 193 GFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMF 372
GF IHSQ+ +P+CP G+S LW G+SL ++ AH QDLG GSCLR FSTMP+ +
Sbjct: 1205 GFLLVIHSQSVQVPKCPDGSSLLWVGYSLAYLKGQKNAHAQDLGQAGSCLRVFSTMPFSY 1264
Query: 373 CNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQS 552
CN C F+ R D S+WLST P+P M P+ +++ ++ISRC VCE + + HSQ
Sbjct: 1265 CN-KAACHFSSRNDKSYWLSTAAPIP--MMPVFGQEISSHISRCVVCETVSPAVVFHSQE 1321
Query: 553 NTVPTCPNGWEELWIGYSFLMHT-AGADASGQSLISPGSCLREFRNRPFIECNG-LGRCN 726
+T P CP GW LW GYSFLMHT AG + SGQ+L S GSCL+ F+ P IEC G G C+
Sbjct: 1322 HTAPACPQGWRSLWTGYSFLMHTGAGDEGSGQALTSSGSCLKNFQTHPIIECQGPQGSCH 1381
Query: 727 YFATAVSYWXSTIDDNKMFLKPEQKTLKA-DRV-TKVSRCAVCMR 855
YF+ S+W +TI + F P T+KA DR +K S+C VC+R
Sbjct: 1382 YFSNLYSFWLTTISPTEQFKAPRPGTIKAPDRQRSKTSQCHVCLR 1426
Score = 67.3 bits (157), Expect = 1e-09
Identities = 40/111 (36%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Frame = +1
Query: 520 PTRTIAVHSQSNTVPTCPNGWEELWIGYSFLMHTAGADASGQSLISPGSCLREFRNRPFI 699
P + +HSQS VP CP+G LW+GYS +A Q L GSCLR F PF
Sbjct: 1204 PGFLLVIHSQSVQVPKCPDGSSLLWVGYSLAYLKGQKNAHAQDLGQAGSCLRVFSTMPFS 1263
Query: 700 ECNGLGRCNYFA-TAVSYWXSTIDDNKMFLKPEQKTLKADRVTKVSRCAVC 849
CN C++ + SYW ST P + + +SRC VC
Sbjct: 1264 YCN-KAACHFSSRNDKSYWLSTAAP-----IPMMPVFGQEISSHISRCVVC 1308
>UniRef50_UPI00015A592A Cluster: Type IV collagen alpha 4 chain; n=3;
Danio rerio|Rep: Type IV collagen alpha 4 chain - Danio
rerio
Length = 1639
Score = 236 bits (578), Expect = 1e-60
Identities = 109/226 (48%), Positives = 148/226 (65%), Gaps = 4/226 (1%)
Frame = +1
Query: 187 SRGFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPY 366
S GF +HSQ+R +P CPAG + LW G+SL+++ +AH QDLG GSCL FSTMP+
Sbjct: 1415 STGFLLVMHSQSRYVPTCPAGLTQLWNGYSLLYLEGQERAHTQDLGQAGSCLPVFSTMPF 1474
Query: 367 MFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHS 546
CN+ + CD+A R D S+WLST P+P P++ +D+ +ISRC VCEAPT TIA+HS
Sbjct: 1475 SCCNM-DTCDYASRNDKSYWLSTNAPIP--NKPLKGQDIEEHISRCVVCEAPTPTIAIHS 1531
Query: 547 QSNTVPTCPNGWEELWIGYSFLMHT-AGADASGQSLISPGSCLREFRNRPFIECNG-LGR 720
Q P CP W LW G+SF+M+T +G + GQSL S GSCL++FR++PF+EC G G
Sbjct: 1532 QDRLDPVCPPKWRSLWTGFSFMMYTGSGDEGGGQSLTSTGSCLQDFRSQPFVECQGPRGT 1591
Query: 721 CNYFATAVSYWXSTIDDNKMFLKPEQKTLKADRVTK--VSRCAVCM 852
C+YFA+ S+W TID P + +R + SRC++CM
Sbjct: 1592 CSYFASIYSFW-MTIDMEHNDSSPHGPVITEERQQRDSTSRCSICM 1636
>UniRef50_Q4TZW9 Cluster: Type IV collagen alpha 4 chain; n=3; Danio
rerio|Rep: Type IV collagen alpha 4 chain - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 240
Score = 236 bits (578), Expect = 1e-60
Identities = 109/226 (48%), Positives = 148/226 (65%), Gaps = 4/226 (1%)
Frame = +1
Query: 187 SRGFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPY 366
S GF +HSQ+R +P CPAG + LW G+SL+++ +AH QDLG GSCL FSTMP+
Sbjct: 13 STGFLLVMHSQSRYVPTCPAGLTQLWNGYSLLYLEGQERAHTQDLGQAGSCLPVFSTMPF 72
Query: 367 MFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHS 546
CN+ + CD+A R D S+WLST P+P P++ +D+ +ISRC VCEAPT TIA+HS
Sbjct: 73 SCCNM-DTCDYASRNDKSYWLSTNAPIP--NKPLKGQDIEEHISRCVVCEAPTPTIAIHS 129
Query: 547 QSNTVPTCPNGWEELWIGYSFLMHT-AGADASGQSLISPGSCLREFRNRPFIECNG-LGR 720
Q P CP W LW G+SF+M+T +G + GQSL S GSCL++FR++PF+EC G G
Sbjct: 130 QDRLDPVCPPKWRNLWTGFSFMMYTGSGDEGGGQSLTSTGSCLQDFRSQPFVECQGPRGT 189
Query: 721 CNYFATAVSYWXSTIDDNKMFLKPEQKTLKADRVTK--VSRCAVCM 852
C+YFA+ S+W TID P + +R + SRC++CM
Sbjct: 190 CSYFASIYSFW-MTIDMEHNDSSPHGPVITEERQQRDSTSRCSICM 234
>UniRef50_O09238 Cluster: Collagen type IV; n=2; Pseudocorticium
jarrei|Rep: Collagen type IV - Pseudocorticium jarrei
Length = 854
Score = 221 bits (539), Expect = 5e-56
Identities = 106/229 (46%), Positives = 139/229 (60%), Gaps = 2/229 (0%)
Frame = +1
Query: 193 GFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMF 372
G +HSQT IPQCP + LW G+SL+ + NG GQDLG PGSC+ F MP +
Sbjct: 629 GLLLVVHSQTTNIPQCPNDYTRLWVGYSLLQLTGNGLGVGQDLGDPGSCMPSFHPMPVVR 688
Query: 373 CNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQS 552
CN C+FA+R+D S+WLST P P+ D+ +ISRC VCE+ + +IAVHSQ
Sbjct: 689 CNPMQRCEFARRKDESYWLSTNATRP--PIPVSGSDIEEHISRCSVCESNSISIAVHSQD 746
Query: 553 NTVPTCPNGWEELWIGYSFLMHTAG-ADASGQSLISPGSCLREFRNRPFIECNGLGRCNY 729
+ VP C GW LW G+SFL TA A+ +GQ L SPGSCL+ FR+ PFI C G G+C+Y
Sbjct: 747 SNVPDCFPGWVTLWTGFSFLQQTAAQAEGTGQGLESPGSCLQHFRSTPFIGCGGRGQCSY 806
Query: 730 FATAVSYWXSTIDDNKMFLKPEQKTLKADRVTK-VSRCAVCMRQWLGQR 873
+ + SYW +D F E T + K +SRC VC +W+G+R
Sbjct: 807 DSVSGSYWMIVLDALNPFQDTEPGTYPVSDIEKRLSRCRVC--EWVGRR 853
Score = 68.1 bits (159), Expect = 6e-10
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Frame = +1
Query: 184 KSRGFYFTIHSQTRLIPQCPAGTSSLWEGFSLI-HIVANGKAHGQDLGAPGSCLRKFSTM 360
+S +HSQ +P C G +LW GFS + A + GQ L +PGSCL+ F +
Sbjct: 734 ESNSISIAVHSQDSNVPDCFPGWVTLWTGFSFLQQTAAQAEGTGQGLESPGSCLQHFRST 793
Query: 361 PYMFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTY--------ISRCQVCE 516
P++ C C + S+W+ + A+ P Q + GTY +SRC+VCE
Sbjct: 794 PFIGCGGRGQCSY-DSVSGSYWMIVLD----ALNPFQDTEPGTYPVSDIEKRLSRCRVCE 848
>UniRef50_UPI0000DBF028 Cluster: UPI0000DBF028 related cluster; n=9;
Rattus norvegicus|Rep: UPI0000DBF028 UniRef100 entry -
Rattus norvegicus
Length = 1549
Score = 182 bits (442), Expect = 3e-44
Identities = 79/141 (56%), Positives = 99/141 (70%)
Frame = +1
Query: 193 GFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMF 372
G+ HSQ+ +P CP G S LW G+SL+ + KAH QDLG GSCL +FSTMP+++
Sbjct: 1412 GYTLVKHSQSEHVPPCPIGMSQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIY 1471
Query: 373 CNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQS 552
CN+N VC +A+R D S+WLST P+P M P+ + YISRC VCEAP++ IAVHSQ
Sbjct: 1472 CNINEVCHYARRNDKSYWLSTTAPIP--MMPVGETQIPQYISRCSVCEAPSQAIAVHSQ- 1528
Query: 553 NTVPTCPNGWEELWIGYSFLM 615
+TVP CP GW LWIGYSFLM
Sbjct: 1529 DTVPQCPLGWHSLWIGYSFLM 1549
Score = 71.7 bits (168), Expect = 5e-11
Identities = 43/108 (39%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Frame = +1
Query: 529 TIAVHSQSNTVPTCPNGWEELWIGYSFLMHTAGADASGQSLISPGSCLREFRNRPFIECN 708
T+ HSQS VP CP G +LW+GYS L A Q L GSCL F PFI CN
Sbjct: 1414 TLVKHSQSEHVPPCPIGMSQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCN 1473
Query: 709 GLGRCNYF-ATAVSYWXSTIDDNKMFLKPEQKTLKADRVTKVSRCAVC 849
C+Y SYW ST M E + + +SRC+VC
Sbjct: 1474 INEVCHYARRNDKSYWLSTTAPIPMMPVGETQIPQ-----YISRCSVC 1516
>UniRef50_Q5C3P1 Cluster: SJCHGC06113 protein; n=2;
Platyhelminthes|Rep: SJCHGC06113 protein - Schistosoma
japonicum (Blood fluke)
Length = 587
Score = 177 bits (431), Expect = 6e-43
Identities = 89/225 (39%), Positives = 122/225 (54%), Gaps = 7/225 (3%)
Frame = +1
Query: 202 FTIHSQTRLIPQ--CPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFC 375
F H QT + CP GT+ L+ G+S + DLG P SCL KFS++P C
Sbjct: 362 FARHYQTPFVENLTCPGGTNKLFTGYSYVMGGGVDDLVSMDLGTPSSCLSKFSSLPMTQC 421
Query: 376 NLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSN 555
+ C + R + S+WL+T +P + PI I+RC VCEAP+ A HSQ
Sbjct: 422 ERDTTCQSSMRHERSYWLATL--VPRSEQPIPVNQTADQIARCVVCEAPSHVFAFHSQGE 479
Query: 556 TVPTCPNGWEELWIGYSFLMHTAGADASGQSLISPGSCLREFRNRPFIEC-NGLGRCNYF 732
T+ CP+ W ELW G S ++HT+GA GQ L SPGSC+ FR P IEC N +G C+Y+
Sbjct: 480 TLQPCPSTWTELWTGVSLILHTSGAHGGGQQLSSPGSCMEHFRYSPVIECNNNVGMCHYW 539
Query: 733 ATAVSYWXSTIDDN-KMFLKPEQKTLKADR---VTKVSRCAVCMR 855
+ A Y+ ++ N F KP +KA + VS+C VCM+
Sbjct: 540 SDAKVYYLRALNPNITQFEKPVGFVMKAAEGPVLNNVSKCRVCMK 584
>UniRef50_UPI0000DA44CD Cluster: PREDICTED: similar to procollagen,
type IV, alpha 6; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to procollagen, type IV, alpha 6 - Rattus
norvegicus
Length = 1405
Score = 153 bits (370), Expect = 2e-35
Identities = 67/129 (51%), Positives = 86/129 (66%)
Frame = +1
Query: 193 GFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMF 372
G+ HSQ+ +P CP G S LW G+SL+ + KAH QDLG GSCL +FSTMP+++
Sbjct: 1248 GYTLVKHSQSEHVPPCPIGMSQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIY 1307
Query: 373 CNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQS 552
CN+N VC +A+R D S+WLST P+P M P+ + YISRC VCEAP++ IAVHSQ
Sbjct: 1308 CNINEVCHYARRNDKSYWLSTTAPIP--MMPVGETQIPQYISRCSVCEAPSQAIAVHSQD 1365
Query: 553 NTVPTCPNG 579
N T P G
Sbjct: 1366 NHRSTVPFG 1374
Score = 71.7 bits (168), Expect = 5e-11
Identities = 43/108 (39%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Frame = +1
Query: 529 TIAVHSQSNTVPTCPNGWEELWIGYSFLMHTAGADASGQSLISPGSCLREFRNRPFIECN 708
T+ HSQS VP CP G +LW+GYS L A Q L GSCL F PFI CN
Sbjct: 1250 TLVKHSQSEHVPPCPIGMSQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCN 1309
Query: 709 GLGRCNYF-ATAVSYWXSTIDDNKMFLKPEQKTLKADRVTKVSRCAVC 849
C+Y SYW ST M E + + +SRC+VC
Sbjct: 1310 INEVCHYARRNDKSYWLSTTAPIPMMPVGETQIPQ-----YISRCSVC 1352
>UniRef50_Q4SB07 Cluster: Chromosome undetermined SCAF14677, whole
genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome undetermined SCAF14677, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 856
Score = 117 bits (281), Expect = 1e-24
Identities = 53/111 (47%), Positives = 72/111 (64%)
Frame = +1
Query: 196 FYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFC 375
F FT HSQ IP+CPAG++ ++ G+SL+ I N +AHGQDLG GSCL +F+TMP++FC
Sbjct: 736 FLFTRHSQELYIPECPAGSTQVYSGYSLLFINGNNRAHGQDLGTLGSCLPRFTTMPFLFC 795
Query: 376 NLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTR 528
N + C +A R DYS+WLST + + M I + +YISR E R
Sbjct: 796 NTDRTCRYASRNDYSYWLSTNKMVLSNMPLISGDLLRSYISRKPESERKVR 846
Score = 62.1 bits (144), Expect = 4e-08
Identities = 35/83 (42%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 541 HSQSNTVPTCPNGWEELWIGYSFLMHTAGADASGQSLISPGSCLREFRNRPFIECNGLGR 720
HSQ +P CP G +++ GYS L A GQ L + GSCL F PF+ CN
Sbjct: 741 HSQELYIPECPAGSTQVYSGYSLLFINGNNRAHGQDLGTLGSCLPRFTTMPFLFCNTDRT 800
Query: 721 CNYFA-TAVSYWXSTIDDNKMFL 786
C Y + SYW ST NKM L
Sbjct: 801 CRYASRNDYSYWLST---NKMVL 820
>UniRef50_A7T3G2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 590
Score = 100 bits (240), Expect = 9e-20
Identities = 39/82 (47%), Positives = 56/82 (68%)
Frame = +1
Query: 193 GFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMF 372
GFY HSQT P+CP LW+G+SL+++ + +HGQDLG GSCL++F+TMPY++
Sbjct: 475 GFYIVKHSQTTTPPECPPTYDKLWDGYSLLYVQGHDVSHGQDLGQAGSCLKRFTTMPYLY 534
Query: 373 CNLNNVCDFAQREDYSFWLSTP 438
CN+ C++A R DYS +P
Sbjct: 535 CNIFGKCNYASRNDYSLLDDSP 556
Score = 76.6 bits (180), Expect = 2e-12
Identities = 45/109 (41%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Frame = +1
Query: 532 IAVHSQSNTVPTCPNGWEELWIGYSFLMHTAGADAS-GQSLISPGSCLREFRNRPFIECN 708
I HSQ+ T P CP +++LW GYS L++ G D S GQ L GSCL+ F P++ CN
Sbjct: 478 IVKHSQTTTPPECPPTYDKLWDGYS-LLYVQGHDVSHGQDLGQAGSCLKRFTTMPYLYCN 536
Query: 709 GLGRCNYFATAVSYW---XSTIDDNKMFLKPEQKTLKADRVTKVSRCAV 846
G+CNY A+ Y S ID + LK ++ DR KVS V
Sbjct: 537 IFGKCNY-ASRNDYSLLDDSPIDHRNVKLKAIKERYSEDRFMKVSEIKV 584
>UniRef50_A7T795 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 331
Score = 99.1 bits (236), Expect = 3e-19
Identities = 38/78 (48%), Positives = 54/78 (69%)
Frame = +1
Query: 184 KSRGFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMP 363
K GFY HSQT P+CP LW+G+SL+++ + +HGQDLG GSCL++F+TMP
Sbjct: 253 KGVGFYIVKHSQTTTPPECPPTYDKLWDGYSLLYVQGHDVSHGQDLGQAGSCLKRFTTMP 312
Query: 364 YMFCNLNNVCDFAQREDY 417
Y++CN+ C++A R DY
Sbjct: 313 YLYCNIFGKCNYASRNDY 330
Score = 70.1 bits (164), Expect = 1e-10
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +1
Query: 532 IAVHSQSNTVPTCPNGWEELWIGYSFLMHTAGADAS-GQSLISPGSCLREFRNRPFIECN 708
I HSQ+ T P CP +++LW GYS L++ G D S GQ L GSCL+ F P++ CN
Sbjct: 259 IVKHSQTTTPPECPPTYDKLWDGYS-LLYVQGHDVSHGQDLGQAGSCLKRFTTMPYLYCN 317
Query: 709 GLGRCNY 729
G+CNY
Sbjct: 318 IFGKCNY 324
>UniRef50_Q5BYE6 Cluster: SJCHGC08138 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08138 protein - Schistosoma
japonicum (Blood fluke)
Length = 206
Score = 97.9 bits (233), Expect = 6e-19
Identities = 47/113 (41%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Frame = +1
Query: 193 GFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPY-- 366
GF FT+HSQ P CP T+ ++ G+SL+ + + + DLG PGSCLRKFS MP+
Sbjct: 93 GFLFTVHSQDSQPPSCPIYTTPVYTGYSLVTLQGDDDSTTMDLGTPGSCLRKFSIMPFAN 152
Query: 367 MFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPT 525
F +N C R S+WLST E ++P + ++ YISRC VC++ T
Sbjct: 153 CFAKVNGNCQINMRNGRSYWLSTLE--QYMLSPARVENIKPYISRCIVCQSRT 203
Score = 60.9 bits (141), Expect = 9e-08
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Frame = +1
Query: 538 VHSQSNTVPTCPNGWEELWIGYSFLMHTAGADASGQSLISPGSCLREFRNRPFIECNGL- 714
VHSQ + P+CP ++ GYS + D++ L +PGSCLR+F PF C
Sbjct: 98 VHSQDSQPPSCPIYTTPVYTGYSLVTLQGDDDSTTMDLGTPGSCLRKFSIMPFANCFAKV 157
Query: 715 -GRCNY-FATAVSYWXSTIDDNKMFLKPEQ-KTLKADRVTKVSRCAVCM-RQWL 864
G C SYW ST++ + L P + + +K +SRC VC R WL
Sbjct: 158 NGNCQINMRNGRSYWLSTLE--QYMLSPARVENIK----PYISRCIVCQSRTWL 205
>UniRef50_UPI000155E4F1 Cluster: PREDICTED: similar to alpha3 type IV
collagen; n=1; Equus caballus|Rep: PREDICTED: similar to
alpha3 type IV collagen - Equus caballus
Length = 1658
Score = 56.8 bits (131), Expect = 1e-06
Identities = 50/166 (30%), Positives = 71/166 (42%), Gaps = 1/166 (0%)
Frame = +2
Query: 296 MGKLMAKI*VPLAVAYANSQQCHTCSVI*TTFVISLNEKTIVSGCRRQNPCPWL*LLYKQ 475
M K M K LA A ++ QCH+ SV T +VIS E I +GC+ Q+ C W L
Sbjct: 1467 MNKPMDKTWELLAAACSDLPQCHSYSVTSTMYVISHRETIIHTGCQHQHXCQWTWLQLLA 1526
Query: 476 ET*AHIFQDVKFAKLRHERSLYTVKVIQYPPALMAGKNSGSVTAF*CTPLAQMHR-DKVL 652
+ I K+ +T K + +P MAG SG C + + K
Sbjct: 1527 GPWSLILAGALSVKVLRLPXPFTAKPLTFPHVPMAGFLSGKDFLSSCLQVQVLRALGKHW 1586
Query: 653 YLLGHVCESSVTDHSLNVTVSAVATISPQPSRTGYLL*MITKCS*N 790
+L +S H NVT AT P+ +G+L + +CS N
Sbjct: 1587 HLPDPAWRNSEPVHLXNVTEEERATTIQIPTVSGWLHXIQQECSEN 1632
>UniRef50_A7SF77 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 122
Score = 35.9 bits (79), Expect = 2.9
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +1
Query: 466 IQARDVGTYISRCQVCEAPTRTIAVHSQSNTVPTCPNGWEELWIGYSFLMHTAGA 630
I AR + Y + C C P RT + + T CP+GW + GY H A A
Sbjct: 15 IFARGLHDYDAPCAACYVPKRTANIMIPATTA--CPSGWTREYWGYLMTSHYAQA 67
>UniRef50_UPI000023D35B Cluster: hypothetical protein FG08200.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG08200.1 - Gibberella zeae PH-1
Length = 557
Score = 35.5 bits (78), Expect = 3.8
Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 9/134 (6%)
Frame = +1
Query: 286 IVANGKAHG--QDLGAPGSCLRKFSTMPYMFCNLNNVCDFAQREDYSFWLSTPEPMPMAM 459
I++ G + G D+ PG+ F+ ++FC++N C + RE ++ L P P+A
Sbjct: 232 IISLGMSQGLLDDIPEPGTLF--FADNKFLFCDVN--CSYVFRETNTYTLDNPMKAPIAA 287
Query: 460 TPIQARDVGTYISRCQVCEAPTRTIAV-------HSQSNTVPTCPNGWEELWIGYSFLMH 618
+ ++GT+ +V + T V ++ T+P+ E++++ + H
Sbjct: 288 ITDRKVNIGTHCDAFKVRRSQNETAEVITIQDGGKDRNVTLPSKEVPGEKVYM--TSASH 345
Query: 619 TAGADASGQSLISP 660
G D S S+ P
Sbjct: 346 HCGKDCSVVSIFEP 359
>UniRef50_UPI0000DB7911 Cluster: PREDICTED: similar to CG12950-PA;
n=2; Apocrita|Rep: PREDICTED: similar to CG12950-PA -
Apis mellifera
Length = 954
Score = 34.3 bits (75), Expect = 8.8
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 412 DYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSNTVPTCPN 576
D +F+ + EP + + I+ RD G Y R ++PTR +H P PN
Sbjct: 157 DRAFFRTVTEPATLNINHIEERDGGEYRCRVDFAKSPTRNSRIHLTVIVPPHKPN 211
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,112,686,806
Number of Sequences: 1657284
Number of extensions: 20743936
Number of successful extensions: 46060
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 43785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45883
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 167764261600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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