Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_G04_e319_14.seq
         (1562 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...   269   2e-73
AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione S-tran...    25   5.9  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score =  269 bits (659), Expect = 2e-73
 Identities = 120/224 (53%), Positives = 157/224 (70%), Gaps = 3/224 (1%)
 Frame = +1

Query: 193  GFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMF 372
            G     HSQ+  +P C  G   LW+G+SL+++  N   H QDLG+ GSC+RKFST+P + 
Sbjct: 802  GILLVRHSQSDEVPVCEPGHLKLWDGYSLLYVDGNDYPHNQDLGSAGSCVRKFSTLPILA 861

Query: 373  CNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQS 552
            C  NNVC++A R D +FWLST  P+P  M P+   ++  YISRC VCEAPT  IAVHSQ+
Sbjct: 862  CGQNNVCNYASRNDRTFWLSTSAPIP--MMPVTENEMRPYISRCTVCEAPTNVIAVHSQT 919

Query: 553  NTVPTCPNGWEELWIGYSFLMHTA-GADASGQSLISPGSCLREFRNRPFIECN-GLGRCN 726
              +P CPNGW+ LWIGYSFLMHTA G    GQSL  PGSCL +FR  PFIECN G G C+
Sbjct: 920  LHIPECPNGWDGLWIGYSFLMHTAVGHGGGGQSLSGPGSCLEDFRATPFIECNGGKGHCH 979

Query: 727  YFATAVSYWXSTIDDNKMFLKPEQKTLKA-DRVTKVSRCAVCMR 855
            Y+ T  S+W  +++D++ F +PEQ+TLKA + +++VSRC VC+R
Sbjct: 980  YYETQTSFWLVSLEDHQQFQRPEQQTLKAGNLLSRVSRCQVCIR 1023



 Score = 25.0 bits (52), Expect = 5.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 75  HEAYKXIQGRVGLKGFEGLQGI 140
           ++  K  QGR G+ G  G+QG+
Sbjct: 213 NDGLKGFQGRKGMMGAPGIQGV 234


>AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione
           S-transferase D12 protein.
          Length = 211

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 553 NTVPTCPNGWEELWIGYSFLMHTAGADASGQSLISPGSCLR 675
           +T+PT  +    LW  Y+ L++ A   A   SL     C R
Sbjct: 49  HTIPTLVDNGHILWESYAILIYLAEKYALDDSLYPKDVCER 89


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,192,125
Number of Sequences: 2352
Number of extensions: 22895
Number of successful extensions: 67
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 184096935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)