Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_G04_e319_14.seq
(1562 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type ... 301 1e-81
AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA... 301 1e-81
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,... 265 1e-70
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,... 265 1e-70
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,... 265 1e-70
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 253 4e-67
M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-relate... 253 4e-67
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 253 4e-67
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 253 4e-67
BT024436-1|ABC86498.1| 104|Drosophila melanogaster IP02181p pro... 30 10.0
>U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type IV
alpha 2 protein.
Length = 1761
Score = 301 bits (740), Expect = 1e-81
Identities = 132/226 (58%), Positives = 163/226 (72%), Gaps = 1/226 (0%)
Frame = +1
Query: 184 KSRGFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMP 363
KSRGF F HSQ+ +PQCPA T+ LWEG+SL VA +A GQDLG GSC+ +F+TMP
Sbjct: 1510 KSRGFIFARHSQSVHVPQCPANTNLLWEGYSLSGNVAASRAVGQDLGQSGSCMMRFTTMP 1569
Query: 364 YMFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVH 543
YM C++ NVC FAQ D S WLST EPMPM MTPIQ RD+ YISRC VCE TR IA+H
Sbjct: 1570 YMLCDITNVCHFAQNNDDSLWLSTAEPMPMTMTPIQGRDLMKYISRCVVCETTTRIIALH 1629
Query: 544 SQSNTVPTCPNGWEELWIGYSFLMHTA-GADASGQSLISPGSCLREFRNRPFIECNGLGR 720
SQS ++P CP GWEE+W GYS+ M T GQ+L+SPGSCL EFR +P IEC+G GR
Sbjct: 1630 SQSMSIPDCPGGWEEMWTGYSYFMSTLDNVGGVGQNLVSPGSCLEEFRAQPVIECHGHGR 1689
Query: 721 CNYFATAVSYWXSTIDDNKMFLKPEQKTLKADRVTKVSRCAVCMRQ 858
CNY+ S+W + I++ F++P Q+TLKAD +K+SRC VC R+
Sbjct: 1690 CNYYDALASFWLTVIEEQDQFVQPRQQTLKADFTSKISRCTVCRRR 1735
>AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA
protein.
Length = 1940
Score = 301 bits (740), Expect = 1e-81
Identities = 132/226 (58%), Positives = 163/226 (72%), Gaps = 1/226 (0%)
Frame = +1
Query: 184 KSRGFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMP 363
KSRGF F HSQ+ +PQCPA T+ LWEG+SL VA +A GQDLG GSC+ +F+TMP
Sbjct: 1512 KSRGFIFARHSQSVHVPQCPANTNLLWEGYSLSGNVAASRAVGQDLGQSGSCMMRFTTMP 1571
Query: 364 YMFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVH 543
YM C++ NVC FAQ D S WLST EPMPM MTPIQ RD+ YISRC VCE TR IA+H
Sbjct: 1572 YMLCDITNVCHFAQNNDDSLWLSTAEPMPMTMTPIQGRDLMKYISRCVVCETTTRIIALH 1631
Query: 544 SQSNTVPTCPNGWEELWIGYSFLMHTA-GADASGQSLISPGSCLREFRNRPFIECNGLGR 720
SQS ++P CP GWEE+W GYS+ M T GQ+L+SPGSCL EFR +P IEC+G GR
Sbjct: 1632 SQSMSIPDCPGGWEEMWTGYSYFMSTLDNVGGVGQNLVSPGSCLEEFRAQPVIECHGHGR 1691
Query: 721 CNYFATAVSYWXSTIDDNKMFLKPEQKTLKADRVTKVSRCAVCMRQ 858
CNY+ S+W + I++ F++P Q+TLKAD +K+SRC VC R+
Sbjct: 1692 CNYYDALASFWLTVIEEQDQFVQPRQQTLKADFTSKISRCTVCRRR 1737
>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
isoform C protein.
Length = 1779
Score = 265 bits (649), Expect = 1e-70
Identities = 118/224 (52%), Positives = 157/224 (70%), Gaps = 3/224 (1%)
Frame = +1
Query: 193 GFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMF 372
G T HSQ+ +P C AG + LW G+SL+++ N AH QDLG+PGSC+ +FST+P +
Sbjct: 1555 GILITRHSQSETVPACSAGHTELWTGYSLLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLS 1614
Query: 373 CNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQS 552
C NNVC++A R D +FWL+T +P M P++ ++ YISRC VCEAP IAVHSQ+
Sbjct: 1615 CGQNNVCNYASRNDKTFWLTTNAAIP--MMPVENIEIRQYISRCVVCEAPANVIAVHSQT 1672
Query: 553 NTVPTCPNGWEELWIGYSFLMHTA-GADASGQSLISPGSCLREFRNRPFIECNGL-GRCN 726
VP CPNGWE LWIGYSFLMHTA G GQ+L SPGSCL +FR PFIECNG G C+
Sbjct: 1673 IEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAKGTCH 1732
Query: 727 YFATAVSYWXSTIDDNKMFLKPEQKTLKA-DRVTKVSRCAVCMR 855
++ T S+W ++ ++ F +P+Q+T+KA +R + VSRC VCM+
Sbjct: 1733 FYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMK 1776
>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
isoform B protein.
Length = 1779
Score = 265 bits (649), Expect = 1e-70
Identities = 118/224 (52%), Positives = 157/224 (70%), Gaps = 3/224 (1%)
Frame = +1
Query: 193 GFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMF 372
G T HSQ+ +P C AG + LW G+SL+++ N AH QDLG+PGSC+ +FST+P +
Sbjct: 1555 GILITRHSQSETVPACSAGHTELWTGYSLLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLS 1614
Query: 373 CNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQS 552
C NNVC++A R D +FWL+T +P M P++ ++ YISRC VCEAP IAVHSQ+
Sbjct: 1615 CGQNNVCNYASRNDKTFWLTTNAAIP--MMPVENIEIRQYISRCVVCEAPANVIAVHSQT 1672
Query: 553 NTVPTCPNGWEELWIGYSFLMHTA-GADASGQSLISPGSCLREFRNRPFIECNGL-GRCN 726
VP CPNGWE LWIGYSFLMHTA G GQ+L SPGSCL +FR PFIECNG G C+
Sbjct: 1673 IEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAKGTCH 1732
Query: 727 YFATAVSYWXSTIDDNKMFLKPEQKTLKA-DRVTKVSRCAVCMR 855
++ T S+W ++ ++ F +P+Q+T+KA +R + VSRC VCM+
Sbjct: 1733 FYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMK 1776
>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
isoform A protein.
Length = 1779
Score = 265 bits (649), Expect = 1e-70
Identities = 118/224 (52%), Positives = 157/224 (70%), Gaps = 3/224 (1%)
Frame = +1
Query: 193 GFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMF 372
G T HSQ+ +P C AG + LW G+SL+++ N AH QDLG+PGSC+ +FST+P +
Sbjct: 1555 GILITRHSQSETVPACSAGHTELWTGYSLLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLS 1614
Query: 373 CNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQS 552
C NNVC++A R D +FWL+T +P M P++ ++ YISRC VCEAP IAVHSQ+
Sbjct: 1615 CGQNNVCNYASRNDKTFWLTTNAAIP--MMPVENIEIRQYISRCVVCEAPANVIAVHSQT 1672
Query: 553 NTVPTCPNGWEELWIGYSFLMHTA-GADASGQSLISPGSCLREFRNRPFIECNGL-GRCN 726
VP CPNGWE LWIGYSFLMHTA G GQ+L SPGSCL +FR PFIECNG G C+
Sbjct: 1673 IEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAKGTCH 1732
Query: 727 YFATAVSYWXSTIDDNKMFLKPEQKTLKA-DRVTKVSRCAVCMR 855
++ T S+W ++ ++ F +P+Q+T+KA +R + VSRC VCM+
Sbjct: 1733 FYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMK 1776
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 253 bits (620), Expect = 4e-67
Identities = 116/224 (51%), Positives = 154/224 (68%), Gaps = 3/224 (1%)
Frame = +1
Query: 193 GFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMF 372
G T HSQ+ +P C AG + LW G+SL+++ N AH QDLG SC+ +FST+P +
Sbjct: 1554 GILITRHSQSETVPACSAGHTELWTGYSLLYVDGNDYAHNQDLG---SCVPRFSTLPVLS 1610
Query: 373 CNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQS 552
C NNVC++A R D +FWL+T +PM P++ ++ YISRC VCEAP IAVHSQ+
Sbjct: 1611 CGQNNVCNYASRNDKTFWLTTNAAIPMM--PVENIEIRQYISRCVVCEAPANVIAVHSQT 1668
Query: 553 NTVPTCPNGWEELWIGYSFLMHTA-GADASGQSLISPGSCLREFRNRPFIECNGL-GRCN 726
VP CPNGWE LWIGYSFLMHTA G GQ+L SPGSCL +FR PFIECNG G C+
Sbjct: 1669 IEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAKGTCH 1728
Query: 727 YFATAVSYWXSTIDDNKMFLKPEQKTLKA-DRVTKVSRCAVCMR 855
++ T S+W ++ ++ F +P+Q+T+KA +R + VSRC VCM+
Sbjct: 1729 FYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMK 1772
>M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-related
collagen protein.
Length = 421
Score = 253 bits (620), Expect = 4e-67
Identities = 116/224 (51%), Positives = 154/224 (68%), Gaps = 3/224 (1%)
Frame = +1
Query: 193 GFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMF 372
G T HSQ+ +P C AG + LW G+SL+++ N AH QDLG SC+ +FST+P +
Sbjct: 200 GILITRHSQSETVPACSAGHTELWTGYSLLYVDGNDYAHNQDLG---SCVPRFSTLPVLS 256
Query: 373 CNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQS 552
C NNVC++A R D +FWL+T +PM P++ ++ YISRC VCEAP IAVHSQ+
Sbjct: 257 CGQNNVCNYASRNDKTFWLTTNAAIPMM--PVENIEIRQYISRCVVCEAPANVIAVHSQT 314
Query: 553 NTVPTCPNGWEELWIGYSFLMHTA-GADASGQSLISPGSCLREFRNRPFIECNGL-GRCN 726
VP CPNGWE LWIGYSFLMHTA G GQ+L SPGSCL +FR PFIECNG G C+
Sbjct: 315 IEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAKGTCH 374
Query: 727 YFATAVSYWXSTIDDNKMFLKPEQKTLKA-DRVTKVSRCAVCMR 855
++ T S+W ++ ++ F +P+Q+T+KA +R + VSRC VCM+
Sbjct: 375 FYETITSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMK 418
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 253 bits (620), Expect = 4e-67
Identities = 116/224 (51%), Positives = 154/224 (68%), Gaps = 3/224 (1%)
Frame = +1
Query: 193 GFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMF 372
G T HSQ+ +P C AG + LW G+SL+++ N AH QDLG SC+ +FST+P +
Sbjct: 1554 GILITRHSQSETVPACSAGHTELWTGYSLLYVDGNDYAHNQDLG---SCVPRFSTLPVLS 1610
Query: 373 CNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQS 552
C NNVC++A R D +FWL+T +PM P++ ++ YISRC VCEAP IAVHSQ+
Sbjct: 1611 CGQNNVCNYASRNDKTFWLTTNAAIPMM--PVENIEIRQYISRCVVCEAPANVIAVHSQT 1668
Query: 553 NTVPTCPNGWEELWIGYSFLMHTA-GADASGQSLISPGSCLREFRNRPFIECNGL-GRCN 726
VP CPNGWE LWIGYSFLMHTA G GQ+L SPGSCL +FR PFIECNG G C+
Sbjct: 1669 IEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAKGTCH 1728
Query: 727 YFATAVSYWXSTIDDNKMFLKPEQKTLKA-DRVTKVSRCAVCMR 855
++ T S+W ++ ++ F +P+Q+T+KA +R + VSRC VCM+
Sbjct: 1729 FYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMK 1772
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 253 bits (620), Expect = 4e-67
Identities = 116/224 (51%), Positives = 154/224 (68%), Gaps = 3/224 (1%)
Frame = +1
Query: 193 GFYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMF 372
G T HSQ+ +P C AG + LW G+SL+++ N AH QDLG SC+ +FST+P +
Sbjct: 1554 GILITRHSQSETVPACSAGHTELWTGYSLLYVDGNDYAHNQDLG---SCVPRFSTLPVLS 1610
Query: 373 CNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQS 552
C NNVC++A R D +FWL+T +PM P++ ++ YISRC VCEAP IAVHSQ+
Sbjct: 1611 CGQNNVCNYASRNDKTFWLTTNAAIPMM--PVENIEIRQYISRCVVCEAPANVIAVHSQT 1668
Query: 553 NTVPTCPNGWEELWIGYSFLMHTA-GADASGQSLISPGSCLREFRNRPFIECNGL-GRCN 726
VP CPNGWE LWIGYSFLMHTA G GQ+L SPGSCL +FR PFIECNG G C+
Sbjct: 1669 IEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAKGTCH 1728
Query: 727 YFATAVSYWXSTIDDNKMFLKPEQKTLKA-DRVTKVSRCAVCMR 855
++ T S+W ++ ++ F +P+Q+T+KA +R + VSRC VCM+
Sbjct: 1729 FYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMK 1772
>BT024436-1|ABC86498.1| 104|Drosophila melanogaster IP02181p
protein.
Length = 104
Score = 29.9 bits (64), Expect = 10.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 823 TKVSRCAVCMRQWLGQRPGAVTL 891
TK+ + VC+R W G+RP +TL
Sbjct: 3 TKLPKLRVCLRCWSGRRPSWITL 25
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,801,790
Number of Sequences: 53049
Number of extensions: 1021117
Number of successful extensions: 2593
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2521
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8778264192
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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