Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_G04_e319_14.seq
         (1562 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   7.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   9.4  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   9.4  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 617 TPLAQMHRDKVLYLLGHVCESSVTDHS 697
           T  +QM+ +K+  LLGH   S V   S
Sbjct: 478 TGTSQMYAEKLSELLGHAFHSQVLSMS 504


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +3

Query: 78  EAYKXIQGRVGLKGFEGLQGI 140
           +  + +QG  G++G +G+QG+
Sbjct: 851 QGVQGVQGVQGVQGVQGVQGV 871



 Score = 22.6 bits (46), Expect = 9.4
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +3

Query: 78  EAYKXIQGRVGLKGFEGLQGI 140
           +  + +QG  G++G +G+QG+
Sbjct: 854 QGVQGVQGVQGVQGVQGVQGV 874


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 465 YTSKRRRHIYFKMSSLR 515
           Y SKRR  +Y+ M  +R
Sbjct: 133 YRSKRRGFVYYTMGQIR 149


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 319,904
Number of Sequences: 438
Number of extensions: 6148
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 54907875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)