Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_G01_e295_13.seq
(1491 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical pr... 67 3e-11
AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain... 67 3e-11
Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical pr... 64 2e-10
Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical pr... 64 2e-10
AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain... 64 2e-10
Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical pr... 60 3e-09
AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromat... 60 3e-09
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 58 1e-08
U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical pr... 47 3e-05
Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical pr... 46 7e-05
U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical pr... 44 4e-04
U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical pr... 41 0.002
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 39 0.008
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 38 0.024
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 38 0.024
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 36 0.074
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 36 0.074
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 36 0.074
Z81035-4|CAB02737.1| 503|Caenorhabditis elegans Hypothetical pr... 35 0.13
U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical pr... 34 0.30
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 32 1.2
Z49909-17|CAD60413.1| 303|Caenorhabditis elegans Hypothetical p... 30 4.9
U41018-3|AAA82326.1| 104|Caenorhabditis elegans Hypothetical pr... 29 6.4
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 29 6.4
L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting... 29 8.5
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting... 29 8.5
L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting... 29 8.5
AF016657-1|AAB93653.1| 361|Caenorhabditis elegans Hypothetical ... 29 8.5
>Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical
protein K01G5.2a protein.
Length = 175
Score = 67.3 bits (157), Expect = 3e-11
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Frame = +2
Query: 308 KPEEFSVEKVLDRRI-KNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLKRE 484
K F VEKVLD+R K G+ E+L++W+G+ D++WEP +NL C E++ +E KRE
Sbjct: 15 KDNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKRE 74
Query: 485 R--EATSASVPDITEENLALXXXXXXXXXXXIEEIEKPRGLARGLLPEKILAGQLFHGTL 658
+ + P+ +E+ E + + G + I+ G L
Sbjct: 75 KPIRKRHSQKPEPSEDQ----ADPEEDKDEKKETNQNDKFSLEGKQLKCIVGLTKGPGEL 130
Query: 659 YFLVKWQDCSEFDVVLGHELGELYPDFMISYYE 757
+FL K+ D ++ E+ YP +I YYE
Sbjct: 131 HFLCKFSD-DTARLLPAKEVNSRYPSQVIRYYE 162
>AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain
protein protein.
Length = 175
Score = 67.3 bits (157), Expect = 3e-11
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Frame = +2
Query: 308 KPEEFSVEKVLDRRI-KNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLKRE 484
K F VEKVLD+R K G+ E+L++W+G+ D++WEP +NL C E++ +E KRE
Sbjct: 15 KDNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKRE 74
Query: 485 R--EATSASVPDITEENLALXXXXXXXXXXXIEEIEKPRGLARGLLPEKILAGQLFHGTL 658
+ + P+ +E+ E + + G + I+ G L
Sbjct: 75 KPIRKRHSQKPEPSEDQ----ADPEEDKDEKKETNQNDKFSLEGKQLKCIVGLTKGPGEL 130
Query: 659 YFLVKWQDCSEFDVVLGHELGELYPDFMISYYE 757
+FL K+ D ++ E+ YP +I YYE
Sbjct: 131 HFLCKFSD-DTARLLPAKEVNSRYPSQVIRYYE 162
>Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical
protein K01G5.2c protein.
Length = 303
Score = 64.5 bits (150), Expect = 2e-10
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = +2
Query: 308 KPEEFSVEKVLDRRI-KNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLKRE 484
K F VEKVLD+R K G+ E+L++W+G+ D++WEP +NL C E++ +E KRE
Sbjct: 15 KDNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKRE 74
Query: 485 R 487
+
Sbjct: 75 K 75
>Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical
protein K01G5.2b protein.
Length = 301
Score = 64.5 bits (150), Expect = 2e-10
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = +2
Query: 308 KPEEFSVEKVLDRRI-KNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLKRE 484
K F VEKVLD+R K G+ E+L++W+G+ D++WEP +NL C E++ +E KRE
Sbjct: 15 KDNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKRE 74
Query: 485 R 487
+
Sbjct: 75 K 75
>AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain
protein protein.
Length = 301
Score = 64.5 bits (150), Expect = 2e-10
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = +2
Query: 308 KPEEFSVEKVLDRRI-KNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLKRE 484
K F VEKVLD+R K G+ E+L++W+G+ D++WEP +NL C E++ +E KRE
Sbjct: 15 KDNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKRE 74
Query: 485 R 487
+
Sbjct: 75 K 75
>Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical
protein K08H2.6 protein.
Length = 184
Score = 60.5 bits (140), Expect = 3e-09
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = +2
Query: 320 FSVEKVLDRRIKNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLKR 481
F VEKVL++R+ G EY +KW+G+ + +WEP +NL C +I YE+ KR
Sbjct: 37 FVVEKVLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQEYEKEAAKR 90
>AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromatin
protein 1 homolog protein.
Length = 184
Score = 60.5 bits (140), Expect = 3e-09
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = +2
Query: 320 FSVEKVLDRRIKNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLKR 481
F VEKVL++R+ G EY +KW+G+ + +WEP +NL C +I YE+ KR
Sbjct: 37 FVVEKVLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQEYEKEAAKR 90
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 58.4 bits (135), Expect = 1e-08
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = +2
Query: 314 EEFSVEKVLDRRIKNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAY--EEARLKRER 487
E ++VE +L+ R K GK E+ +KW GY + N+WEP++N+ P LI A+ EA K E
Sbjct: 6 ELYTVESILEHRKKKGKSEFYIKWLGYDHTHNSWEPKENIVDPTLIEAFFTREAARKAEI 65
Query: 488 EA 493
+A
Sbjct: 66 KA 67
>U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical
protein F32E10.2 protein.
Length = 270
Score = 47.2 bits (107), Expect = 3e-05
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Frame = +2
Query: 236 DQPMETSQTEVTMQQPGTSGPQGGKPEEFSVEKVLDRRIKNGKVEYLLKWKGYSN---ED 406
D + T + +VT Q +SG E++VE+VL R G YL++WKGY +
Sbjct: 66 DSLLSTYKKKVTKQSDDSSG-------EYAVERVLAHRKVKGSPLYLVQWKGYPHPVWNS 118
Query: 407 NTWEPEDNLDCPELISAY----EEARLKREREATSASVPDITEENL 532
WE ED +C +L++AY E+ ++ + + T + P T ++L
Sbjct: 119 EMWE-EDLDNCKDLLAAYKKHQEDLKIAQTPKKTPSKTPKKTPKSL 163
>Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical
protein T09A5.8 protein.
Length = 339
Score = 46.0 bits (104), Expect = 7e-05
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +2
Query: 299 QGGKPEEFSVEKVLDRRIKNGKVEYLLKWKGYSNEDNTWEPEDNL-DCPELISAYEEARL 475
+G E F VEK+L ++ + + ++W GY +++TWEPE++L +C + A +L
Sbjct: 17 EGKSDEIFEVEKILAHKVTDNLLVLQVRWLGYGADEDTWEPEEDLQECASEVVAEYYKKL 76
Query: 476 K 478
K
Sbjct: 77 K 77
>U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical
protein T12E12.2 protein.
Length = 891
Score = 43.6 bits (98), Expect = 4e-04
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +2
Query: 317 EFSVEKVLDRRIKNGKVEYLLKWKGYSNEDNTWEPEDNLD-CPEL 448
+FS V + ++ K YL+ W+GY ++ TWEPE+NL+ C EL
Sbjct: 33 KFSPASVEYDKRRHSKYAYLVHWRGYDWKERTWEPEENLENCEEL 77
>U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical
protein C29H12.5 protein.
Length = 706
Score = 41.1 bits (92), Expect = 0.002
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +2
Query: 371 YLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARL 475
+L+KW GY N++ TWEPE N+ P+ + YE +L
Sbjct: 95 FLVKWLGYGNKEMTWEPESNI--PDSVYLYEYKKL 127
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 39.1 bits (87), Expect = 0.008
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Frame = +2
Query: 314 EEFSVEKVLDRRI--KNGKVEYLLKWKGYSN---EDNTWEPEDNLDCPELISAYEEA 469
E+F+VEK++ R K K +L+ W+GY N WE E + +C +L+ AY+++
Sbjct: 113 EDFAVEKIIAHRFSGKKNKPLFLVMWRGYPNPVSHSEMWENELS-NCKDLLEAYKDS 168
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 37.5 bits (83), Expect = 0.024
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 302 GGKPEEFSVEKVLDRR-IKNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLK 478
G KPE + ++++ + + +YL+KWK S + TWE +D+ I+ YEEA +K
Sbjct: 483 GIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDS-----NIANYEEAIIK 537
Query: 479 REREATSASVPDI 517
+ S DI
Sbjct: 538 YWQHRESKLNEDI 550
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 37.5 bits (83), Expect = 0.024
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 302 GGKPEEFSVEKVLDRR-IKNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLK 478
G KPE + ++++ + + +YL+KWK S + TWE +D+ I+ YEEA +K
Sbjct: 483 GIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDS-----NIANYEEAIIK 537
Query: 479 REREATSASVPDI 517
+ S DI
Sbjct: 538 YWQHRESKLNEDI 550
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 35.9 bits (79), Expect = 0.074
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 302 GGKPEEFSVEKVLDR-RIKNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLK 478
G KPE + ++++ + +YL+KWK S E TWE D+ D I+ YE+A +K
Sbjct: 495 GVKPEWMQIHRIINHLSYAKSQQDYLVKWKELSYEHATWE-RDDTD----IANYEDAIIK 549
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 35.9 bits (79), Expect = 0.074
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 302 GGKPEEFSVEKVLDR-RIKNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLK 478
G KPE + ++++ + +YL+KWK S E TWE D+ D I+ YE+A +K
Sbjct: 495 GVKPEWMQIHRIINHLSYAKSQQDYLVKWKELSYEHATWE-RDDTD----IANYEDAIIK 549
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 35.9 bits (79), Expect = 0.074
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 302 GGKPEEFSVEKVLDR-RIKNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLK 478
G KPE + ++++ + +YL+KWK S E TWE D+ D I+ YE+A +K
Sbjct: 495 GVKPEWMQIHRIINHLSYAKSQQDYLVKWKELSYEHATWE-RDDTD----IANYEDAIIK 549
>Z81035-4|CAB02737.1| 503|Caenorhabditis elegans Hypothetical
protein C15H11.5 protein.
Length = 503
Score = 35.1 bits (77), Expect = 0.13
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 314 EEFSVEKVLDRRIKNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLK 478
E + V+ ++ RI+ +++Y +KW ++ D T E E L C E + Y LK
Sbjct: 43 EFYEVQDIVRSRIEGREIQYTVKWTNWNGGD-TEEAERRLVCTEKLMGYAARTLK 96
>U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical
protein F33G12.5 protein.
Length = 928
Score = 33.9 bits (74), Expect = 0.30
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 218 SQNNRPDQPMETSQT-EVTMQQPGTSGPQGGKPEEFSVEKVLDRRIKNGKVE 370
+Q NR Q M+ Q ++ ++Q G +GP GG P E + + L R ++N K E
Sbjct: 251 AQENRISQLMKDIQMKDLYLKQLGATGPPGGIPNENTNYENLQRELENVKAE 302
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 31.9 bits (69), Expect = 1.2
Identities = 30/150 (20%), Positives = 57/150 (38%), Gaps = 1/150 (0%)
Frame = +2
Query: 368 EYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLKREREATSASVPDITEENLALXXX 547
++ +KW G+S+ NTWE E++L + ++++ +E +
Sbjct: 238 QFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFEC 297
Query: 548 XXXXXXXXIEEIEK-PRGLARGLLPEKILAGQLFHGTLYFLVKWQDCSEFDVVLGHELGE 724
EE +K R +A ++ G + +L+KW D E
Sbjct: 298 EQQMAEELCEEYKKVERVVAHQTSRDRAADGSM---ATEYLIKWSGLPYSDCTWEDE-KM 353
Query: 725 LYPDFMISYYERCAPFSVRHKVAKVPRTAP 814
+ P+ + +YY R +K + V R P
Sbjct: 354 VAPEQIKAYYHRIENLKSPNKNSNVLRKRP 383
>Z49909-17|CAD60413.1| 303|Caenorhabditis elegans Hypothetical
protein C14A4.15 protein.
Length = 303
Score = 29.9 bits (64), Expect = 4.9
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 202 LCERLHCFVHRNISRI-FFKAVAKIPTIIQIKNKQFSLXSLTLV 74
LC L CFVHR R+ FF+ K+ + +Q ++ S +V
Sbjct: 185 LCNMLACFVHRKQKRMQFFETQPKLASTVQTNLLIYACLSTVIV 228
>U41018-3|AAA82326.1| 104|Caenorhabditis elegans Hypothetical
protein ZK816.1 protein.
Length = 104
Score = 29.5 bits (63), Expect = 6.4
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 608 LWLVLEVFQSPQFSFFHFALISFLR 534
+WLV+ F P FF FALI++LR
Sbjct: 1 MWLVILCFVLPAIIFFVFALIAWLR 25
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 29.5 bits (63), Expect = 6.4
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 326 VEKVLDRRIKNGKVEY-LLKWKGYSNEDNTWEP 421
V++V+D ++ E+ L+KWK E+ TWEP
Sbjct: 1106 VDRVVDLITEDDGQEFVLIKWKSLGYEEVTWEP 1138
>L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting
protein protein8, isoform a protein.
Length = 1132
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/52 (25%), Positives = 31/52 (59%)
Frame = -2
Query: 680 LAISQGNTVCHGTIVRPVFSLEVDLWLVLEVFQSPQFSFFHFALISFLRQDS 525
L + + T+C + RP+ S E+ ++LV++ ++ F + +F+ + L+ +S
Sbjct: 19 LFVKETATLCLRVLARPLKSGEIGIFLVIQKWEGGCFHYGYFSFTNPLKVNS 70
>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
protein protein8, isoform b protein.
Length = 1780
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/52 (25%), Positives = 31/52 (59%)
Frame = -2
Query: 680 LAISQGNTVCHGTIVRPVFSLEVDLWLVLEVFQSPQFSFFHFALISFLRQDS 525
L + + T+C + RP+ S E+ ++LV++ ++ F + +F+ + L+ +S
Sbjct: 19 LFVKETATLCLRVLARPLKSGEIGIFLVIQKWEGGCFHYGYFSFTNPLKVNS 70
>L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting
protein protein8, isoform c protein.
Length = 1697
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/52 (25%), Positives = 31/52 (59%)
Frame = -2
Query: 680 LAISQGNTVCHGTIVRPVFSLEVDLWLVLEVFQSPQFSFFHFALISFLRQDS 525
L + + T+C + RP+ S E+ ++LV++ ++ F + +F+ + L+ +S
Sbjct: 19 LFVKETATLCLRVLARPLKSGEIGIFLVIQKWEGGCFHYGYFSFTNPLKVNS 70
>AF016657-1|AAB93653.1| 361|Caenorhabditis elegans Hypothetical
protein C16C4.7 protein.
Length = 361
Score = 29.1 bits (62), Expect = 8.5
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -2
Query: 638 VRPVFSLEVDLWLVLEVFQSPQFSFF--HFALISFL 537
V PVF V ++ V +VFQ P F F+ F++ SFL
Sbjct: 107 VFPVFQFPVPVFPVFQVFQFPVFQFWISSFSVSSFL 142
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,085,034
Number of Sequences: 27780
Number of extensions: 432643
Number of successful extensions: 1280
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4287551336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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