Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_F11_e374_11.seq
(1533 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.20
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.26
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 33 0.46
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 33 0.80
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 32 1.4
SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.4
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 31 1.9
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 31 1.9
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.4
SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.2
SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.2
SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37) 31 3.2
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05) 31 3.2
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.2
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.3
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.3
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.3
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 30 5.7
SB_12940| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.7
SB_52684| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16) 29 7.5
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_5429| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_55248| Best HMM Match : Adeno_E1A (HMM E-Value=7.5) 29 9.9
SB_13204| Best HMM Match : GRP (HMM E-Value=0.0017) 29 9.9
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.9
>SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 34.7 bits (76), Expect = 0.20
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXPRR 1312
PPP P PP PPP PP P R
Sbjct: 55 PPPPPPPPPPPPPPPPPSSSPSR 77
Score = 30.3 bits (65), Expect = 4.3
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPP 1294
PPP P PP PPP PP
Sbjct: 54 PPPPPPPPPPPPPPPPP 70
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 34.3 bits (75), Expect = 0.26
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 1166 PPPSSPSPPPPPPPPPPPPTP 1186
Score = 29.9 bits (64), Expect = 5.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P + P PPP PP P
Sbjct: 1162 PPPPPPPSSPSPPPPPPPPPP 1182
Score = 29.9 bits (64), Expect = 5.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P +P PPP PP P
Sbjct: 1163 PPPPPPSSPSPPPPPPPPPPP 1183
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 33.5 bits (73), Expect = 0.46
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 1241 KPPPXXPXNPPXPPPXPPXKXP 1306
+PPP P PP PPP PP P
Sbjct: 203 QPPPPPPRPPPSPPPPPPPPSP 224
Score = 32.3 bits (70), Expect = 1.1
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXPR 1309
PPP P +PP PPP PP PR
Sbjct: 219 PPPPSP-SPPRPPPPPPPSPPR 239
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXPRR 1312
PPP P +PP PPP PP P R
Sbjct: 207 PPPRPPPSPPPPPP-PPSPSPPR 228
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 1241 KPPPXXPXNPPXPPPXPPXKXP 1306
+PPP P PP P P PP P
Sbjct: 210 RPPPSPPPPPPPPSPSPPRPPP 231
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 32.7 bits (71), Expect = 0.80
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P +PP PPP PP P
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPP 390
Score = 32.7 bits (71), Expect = 0.80
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPP 391
Score = 32.3 bits (70), Expect = 1.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 384 PPPPSPPPPPQPPPPPPPPPP 404
Score = 31.9 bits (69), Expect = 1.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPP 387
Score = 31.9 bits (69), Expect = 1.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 400 PPPPPPPPPPPPPPPPPPPAP 420
Score = 31.9 bits (69), Expect = 1.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 402 PPPPPPPPPPPPPPPPPAPPP 422
Score = 31.9 bits (69), Expect = 1.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 405 PPPPPPPPPPPPPPAPPPPPP 425
Score = 31.9 bits (69), Expect = 1.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 409 PPPPPPPPPPAPPPPPPPPPP 429
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 390 PPPPQPPPPPPPPPPPPPPPP 410
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 391 PPPQPPPPPPPPPPPPPPPPP 411
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 1241 KPPPXXPXNPPXPPPXPPXKXP 1306
+PPP P PP PPP PP P
Sbjct: 394 QPPPPPPPPPPPPPPPPPPPPP 415
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 396 PPPPPPPPPPPPPPPPPPPPP 416
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 397 PPPPPPPPPPPPPPPPPPPPP 417
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 398 PPPPPPPPPPPPPPPPPPPPP 418
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 401 PPPPPPPPPPPPPPPPPPAPP 421
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 412 PPPPPPPAPPPPPPPPPPPPP 432
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P +PP PPP PP P
Sbjct: 381 PPPPPPPSPP-PPPQPPPPPP 400
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +2
Query: 1241 KPPPXXPXNPP--XPPPXPPXKXPR 1309
+PPP P +PP PPP PP PR
Sbjct: 167 QPPPIFPIDPPRTQPPPIPPIDPPR 191
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +2
Query: 1241 KPPPXXPXNPP--XPPPXPPXKXPR 1309
+PPP P +PP PPP PP PR
Sbjct: 180 QPPPIPPIDPPRTQPPPIPPIDPPR 204
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +2
Query: 1241 KPPPXXPXNPP--XPPPXPPXKXPR 1309
+PPP P +PP PPP PP PR
Sbjct: 193 QPPPIPPIDPPRTQPPPIPPIDPPR 217
>SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 31.9 bits (69), Expect = 1.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP PP PPP PP K P
Sbjct: 233 PPPPPAAAPPPPPPPPPVKKP 253
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 683 PPPPPPPPPPPPPPPPPPPQP 703
Score = 30.3 bits (65), Expect = 4.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P P PPP PP P
Sbjct: 695 PPPPPPPQPSTPPPPPPSTPP 715
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP P P
Sbjct: 686 PPPPPPPPPPPPPPPPQPSTP 706
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP P P
Sbjct: 688 PPPPPPPPPPPPPPQPSTPPP 708
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 469 PPPPPPPPPPPPPPPPPPPFP 489
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 471 PPPPPPPPPPPPPPPPPFPPP 491
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 474 PPPPPPPPPPPPPPFPPPPPP 494
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 464 PPPPPPPPPPPPPPPPPPPPP 484
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 465 PPPPPPPPPPPPPPPPPPPPP 485
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 466 PPPPPPPPPPPPPPPPPPPPP 486
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP PP P
Sbjct: 467 PPPPPPPPPPPPPPPPPPPPP 487
>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
Length = 295
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 3/26 (11%)
Frame = +2
Query: 1247 PPXXPXNPPXPP---PXPPXKXPRRG 1315
PP P NPP PP P PP P+ G
Sbjct: 235 PPVPPTNPPVPPTNPPAPPTNPPKPG 260
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 31.1 bits (67), Expect = 2.4
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 1241 KPPPXXPXNPPXPPPXPP 1294
+PPP P PP PPP PP
Sbjct: 866 RPPPPPPPPPPPPPPPPP 883
Score = 30.3 bits (65), Expect = 4.3
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPP 1294
PPP P PP PPP PP
Sbjct: 868 PPPPPPPPPPPPPPPPP 884
Score = 30.3 bits (65), Expect = 4.3
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPP 1294
PPP P PP PPP PP
Sbjct: 869 PPPPPPPPPPPPPPPPP 885
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 1241 KPPPXXPXNPPXPPPXPPXKXP 1306
+P P P PP PPP PP P
Sbjct: 861 RPRPRRPPPPPPPPPPPPPPPP 882
>SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 1241 KPPPXXPXNPPXPPPXPPXKXPR 1309
+PP P PP PPP P PR
Sbjct: 1038 EPPTPPPTEPPTPPPTDPPTQPR 1060
>SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2143
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXPRR 1312
PPP N P PPP PP P++
Sbjct: 86 PPPPPASNVPAPPPPPPVMPPQK 108
>SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37)
Length = 1188
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 1247 PPXXPXNPPXPPPXPPXKXPR 1309
PP P P PPP PP PR
Sbjct: 670 PPSAPTYGPTPPPLPPRVHPR 690
>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
Length = 1878
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPP 1294
PPP P PP PPP PP
Sbjct: 1312 PPPPPPPPPPPPPPLPP 1328
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 1241 KPPPXXPXNPPXPPPXPPXKXP 1306
+PP P PP PPP PP P
Sbjct: 1306 QPPESPPPPPPPPPPPPPPPLP 1327
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -3
Query: 1312 PSGXFXGGXWGGXWGVXGXXWGGFXGXVFG 1223
P G F G GG G G +GG G FG
Sbjct: 418 PGGAFGGSSGGGFGGSSGGSFGGSSGGSFG 447
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 30.3 bits (65), Expect = 4.3
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXPRR 1312
PPP PP PPP PP P R
Sbjct: 974 PPPPGGSAPPPPPPPPPPPPPMR 996
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 30.3 bits (65), Expect = 4.3
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPP 1294
PPP P PP PPP PP
Sbjct: 102 PPPPPPPPPPPPPPPPP 118
Score = 30.3 bits (65), Expect = 4.3
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPP 1294
PPP P PP PPP PP
Sbjct: 103 PPPPPPPPPPPPPPPPP 119
Score = 30.3 bits (65), Expect = 4.3
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPP 1294
PPP P PP PPP PP
Sbjct: 104 PPPPPPPPPPPPPPPPP 120
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.3 bits (65), Expect = 4.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXPRRG 1315
PPP P N P PPP P P G
Sbjct: 395 PPPPPPTNGPPPPPPPTNGPPSEG 418
Score = 29.9 bits (64), Expect = 5.7
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P N P PPP PP P
Sbjct: 365 PPPPPPTNKPPPPP-PPTNGP 384
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P N P PPP PP P
Sbjct: 375 PPPPPPTNGPPPPP-PPTNGP 394
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P N P PPP PP P
Sbjct: 385 PPPPPPTNGPPPPP-PPTNGP 404
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 29.9 bits (64), Expect = 5.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXPRRG 1315
PPP P P PPP PP P G
Sbjct: 305 PPPPPPGGAPPPPPPPPPPPPGDG 328
>SB_12940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -2
Query: 509 IVKMIKLGRLQLPKSFKESEILI*TATY 426
++ I+ RL LP++FKE E+L+ ATY
Sbjct: 56 VLNFIRDERLSLPENFKEYELLLREATY 83
>SB_52684| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 29.5 bits (63), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPP 1294
PP P PP PPP PP
Sbjct: 139 PPQPSPPQPPQPPPQPP 155
>SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16)
Length = 678
Score = 29.5 bits (63), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPP 1294
PPP P P PPP PP
Sbjct: 564 PPPLPPSEDPKPPPPPP 580
>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 29.5 bits (63), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPP 1294
PPP P P PPP PP
Sbjct: 304 PPPPLPAGVPAPPPPPP 320
>SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1271
Score = 29.5 bits (63), Expect = 7.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 1241 KPPPXXPXNPPXPPPXPP 1294
KP P PP PPP PP
Sbjct: 162 KPADPAPMQPPAPPPSPP 179
>SB_5429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 29.5 bits (63), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPP 1294
PP P PP PPP PP
Sbjct: 157 PPQPSPPQPPQPPPQPP 173
>SB_55248| Best HMM Match : Adeno_E1A (HMM E-Value=7.5)
Length = 198
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 1247 PPXXPXNPPXPPPXPPXKXPRR 1312
PP P P PPP PP P R
Sbjct: 147 PPRTPPPEPTPPPTPPPLRPLR 168
>SB_13204| Best HMM Match : GRP (HMM E-Value=0.0017)
Length = 723
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -3
Query: 1357 GVXGFXGFXXXXGXXPSGXFXGGXWGGXWGVXGXXWGGFXG 1235
G G+ G G G F G G WG G GG+ G
Sbjct: 355 GWGGYGGLGGYGGLGGYGGFLGHAGFGGWGFPGGFLGGYGG 395
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P P PPP PP P
Sbjct: 908 PPPPLPLAPEPPPPLPPPPPP 928
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,547,287
Number of Sequences: 59808
Number of extensions: 528366
Number of successful extensions: 2297
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1907
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 4988555225
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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