Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_F11_e374_11.seq
         (1533 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.9  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   3.6  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 1.9
 Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
 Frame = +2

Query: 1241 KPPPXXPXNPP-XPPPXPPXKXPRRG 1315
            +PPP  P  PP  PPP P    P  G
Sbjct: 580  QPPPAPPPPPPMGPPPSPLAGGPLGG 605


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
            methoprene-tolerant protein protein.
          Length = 1115

 Score = 22.6 bits (46), Expect(2) = 3.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 1265 NPPXPPPXPP 1294
            +PP PPP PP
Sbjct: 782  SPPPPPPPPP 791



 Score = 21.0 bits (42), Expect(2) = 3.6
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +2

Query: 1268 PPXPPPXPPXKXP 1306
            PP PPP P    P
Sbjct: 784  PPPPPPPPSSLSP 796


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,098,982
Number of Sequences: 2352
Number of extensions: 19383
Number of successful extensions: 38
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 180032985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)