Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_F11_e374_11.seq
(1533 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 0.44
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 0.44
U38378-1|AAA79751.1| 418|Caenorhabditis elegans Hypothetical pr... 32 1.2
Z75549-6|CAC42343.1| 74|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 31 2.9
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 30 3.8
Z34801-2|CAD82919.1| 884|Caenorhabditis elegans Hypothetical pr... 30 3.8
Z34801-1|CAA84330.1| 860|Caenorhabditis elegans Hypothetical pr... 30 3.8
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 29 8.7
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 8.7
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical protein
R144.4b protein.
Length = 362
Score = 29.9 bits (64), Expect = 5.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP P P
Sbjct: 2 PPPPPPPPPPPPPPPPAASAP 22
Score = 27.9 bits (59), Expect(2) = 0.44
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXP 1291
PPP PP PPP P
Sbjct: 113 PPPTASSAPPVPPPAP 128
Score = 24.2 bits (50), Expect(2) = 0.44
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 1268 PPXPPPXPPXKXP 1306
PP PPP PP P
Sbjct: 155 PPPPPPPPPVSVP 167
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical protein
R144.4a protein.
Length = 360
Score = 29.9 bits (64), Expect = 5.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P PP PPP P P
Sbjct: 2 PPPPPPPPPPPPPPPPAASAP 22
Score = 27.9 bits (59), Expect(2) = 0.44
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXP 1291
PPP PP PPP P
Sbjct: 113 PPPTASSAPPVPPPAP 128
Score = 24.2 bits (50), Expect(2) = 0.44
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 1268 PPXPPPXPPXKXP 1306
PP PPP PP P
Sbjct: 155 PPPPPPPPPVSVP 167
>U38378-1|AAA79751.1| 418|Caenorhabditis elegans Hypothetical protein
R11F4.3 protein.
Length = 418
Score = 31.9 bits (69), Expect = 1.2
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Frame = +2
Query: 1244 PPPXXPXNPPX---PPPXPPXKXPR 1309
P P P NPP PPP PP + PR
Sbjct: 167 PIPDAPTNPPTTTTPPPPPPTRAPR 191
>Z75549-6|CAC42343.1| 74|Caenorhabditis elegans Hypothetical protein
T19C4.7 protein.
Length = 74
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Frame = -3
Query: 1312 PSGXFXGGXWGGXWGVXGX----XWGGFXGXVFG 1223
P G + GG GG WG G WGG+ G +G
Sbjct: 28 PYGGYGGGYGGGPWGYGGGWRRRHWGGYGGGPWG 61
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical protein
Y48E1B.1 protein.
Length = 497
Score = 30.7 bits (66), Expect = 2.9
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 1247 PPXXPXNPPXPPPXPPXKXP 1306
PP P PP PPP PP + P
Sbjct: 354 PPAPPPPPPPPPPPPPPQTP 373
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical protein
F45B8.3 protein.
Length = 241
Score = 30.3 bits (65), Expect = 3.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPPXKXP 1306
PPP P P PPP PP P
Sbjct: 111 PPPPAPAAPCCPPPPPPTPSP 131
>Z34801-2|CAD82919.1| 884|Caenorhabditis elegans Hypothetical
protein F59A2.1b protein.
Length = 884
Score = 30.3 bits (65), Expect = 3.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 385 DNNEKIVETKKNIR*VAVYIRISDSLKLLGNCNLPNLIIF 504
DN +IV ++ + + RI S+KL NLPN++ F
Sbjct: 804 DNKYRIVMRREQVHKLCANFRIEKSMKLSPKPNLPNVLTF 843
>Z34801-1|CAA84330.1| 860|Caenorhabditis elegans Hypothetical
protein F59A2.1a protein.
Length = 860
Score = 30.3 bits (65), Expect = 3.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 385 DNNEKIVETKKNIR*VAVYIRISDSLKLLGNCNLPNLIIF 504
DN +IV ++ + + RI S+KL NLPN++ F
Sbjct: 780 DNKYRIVMRREQVHKLCANFRIEKSMKLSPKPNLPNVLTF 819
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 29.1 bits (62), Expect = 8.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 1244 PPPXXPXNPPXPPPXPP 1294
PPP PP PPP PP
Sbjct: 2280 PPPGYMHTPPLPPPPPP 2296
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 8.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 1247 PPXXPXNPPXPPPXPP 1294
PP P PP PPP PP
Sbjct: 134 PPPTPAAPPPPPPPPP 149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,477,058
Number of Sequences: 27780
Number of extensions: 460630
Number of successful extensions: 2249
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2032
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4411031650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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