Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_F06_e334_12.seq
         (1590 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    24   2.7  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    24   3.6  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   4.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   4.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   6.2  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
 Frame = +1

Query: 619 WTKPFLSVHDRTDYTCNR*FKLKEYIIFXYI----WIVIL 726
           WT  F        + C+   KL+ Y+IF ++    W++IL
Sbjct: 72  WTILFSRSDFFQQFECDNEPKLRHYLIFIFVNVFFWVIIL 111


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -3

Query: 364 ATTVTVAPKTQNNTAPAPASQQIPIEPAAATAYCCVLVSSQL 239
           A  V+V+P T    +P P  +  P + A++        S+QL
Sbjct: 88  AEKVSVSPTTPPTPSPPPEERLTPSKDASSKRIXTAFTSTQL 129


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -3

Query: 397 KLSASKKLAWSATTVTVAPKTQNNTAPAPASQQI 296
           K S ++ L W+ T V   P+TQ     A  +++I
Sbjct: 153 KASTAQALGWAPTNVFTFPETQFIAVTAYQNEKI 186


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 89   IXIFSSQLFNGVSGFICLLFDNIAFVTYCNGGKLFWI 199
            I +FS Q+ N  +GF    F  I + +  +  K+ W+
Sbjct: 957  IEMFSLQILNERAGFTAAGFFPIDYTSAFSSEKIVWL 993


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -2

Query: 398 QTFCIEE-TCVECYHSYCCT*NPKQHSSSSCK 306
           +T C+   TC++  +SY CT  P   + S+C+
Sbjct: 29  ETSCMNGGTCIDGINSYICTCKP-GFTGSNCQ 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 268,426
Number of Sequences: 336
Number of extensions: 5471
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 48037325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)