Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_F06_e334_12.seq
         (1590 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            28   0.64 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            27   1.1  
AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A prot...    26   2.6  
AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A prot...    26   2.6  
AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A prot...    26   2.6  
AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A prot...    26   2.6  
AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1 prot...    26   2.6  
AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1 prot...    25   7.9  
AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    25   7.9  
AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A prot...    25   7.9  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 28.3 bits (60), Expect = 0.64
 Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
 Frame = +3

Query: 165  LLIAMVASFFGYRKLTSGPNTWKIGSWELTKTQQYAVAAA--GSMGICWLAGAGAVLFWV 338
            +++A++A    Y   ++  N+W    WEL K     +     G      +AG+   L   
Sbjct: 2692 IIVAVLAVGGAYVGASAANNSWNPAKWELKKALLGGLVGGLIGGFAPVGIAGSFTFLTGY 2751

Query: 339  LGATVTVVALHAS 377
            +GAT  +  + A+
Sbjct: 2752 IGATAAIGVITAT 2764


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 27.5 bits (58), Expect = 1.1
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = +3

Query: 162  LLLIAMVASFFG-YRKLTSGPNTWKIGSWELTKTQQYAVAAAGSMGICWLAGAGAVLFWV 338
            LL++++V +  G Y   ++   +W    WE+ K    A   A   G   +  AG++ F +
Sbjct: 2689 LLIVSIVTAAVGAYLGASAANKSWNPAKWEVKKAIVGATMGAIVGGFAPVGIAGSITF-L 2747

Query: 339  LGATVTVVAL 368
             GA  T  A+
Sbjct: 2748 AGAVGTTAAV 2757


>AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 26.2 bits (55), Expect = 2.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 357 VVALHASFFDAESLPPSDDPEQFPMM 434
           V+ L A+    +  PP DDPEQ P++
Sbjct: 8   VLLLAAAVLADDRCPPQDDPEQPPVL 33


>AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 26.2 bits (55), Expect = 2.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 357 VVALHASFFDAESLPPSDDPEQFPMM 434
           V+ L A+    +  PP DDPEQ P++
Sbjct: 8   VLLLAAAVLADDRCPPQDDPEQPPVL 33


>AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 26.2 bits (55), Expect = 2.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 357 VVALHASFFDAESLPPSDDPEQFPMM 434
           V+ L A+    +  PP DDPEQ P++
Sbjct: 8   VLLLAAAVLADDRCPPQDDPEQPPVL 33


>AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 26.2 bits (55), Expect = 2.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 357 VVALHASFFDAESLPPSDDPEQFPMM 434
           V+ L A+    +  PP DDPEQ P++
Sbjct: 8   VLLLAAAVLADDRCPPQDDPEQPPVL 33


>AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1
           protein.
          Length = 153

 Score = 26.2 bits (55), Expect = 2.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 357 VVALHASFFDAESLPPSDDPEQFPMM 434
           V+ L A+    +  PP DDPEQ P++
Sbjct: 8   VLLLAAAVLADDRCPPQDDPEQPPVL 33


>AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1
           protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 7.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 357 VVALHASFFDAESLPPSDDPEQFPMM 434
           V+ L A+       PP DDPEQ P++
Sbjct: 8   VLLLAAAVLADVRCPPQDDPEQPPVL 33


>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 7.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 357 VVALHASFFDAESLPPSDDPEQFPMM 434
           V+ L A+    +  PP DDP+Q P++
Sbjct: 8   VLLLAAAVLADDRCPPQDDPKQPPVL 33


>AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 7.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 357 VVALHASFFDAESLPPSDDPEQFPMM 434
           V+ L A+       PP DDPEQ P++
Sbjct: 8   VLLLAAAVLADVRCPPQDDPEQPPVL 33


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,169,447
Number of Sequences: 2352
Number of extensions: 21340
Number of successful extensions: 112
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 112
length of database: 563,979
effective HSP length: 68
effective length of database: 404,043
effective search space used: 186263823
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)