Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_F05_e326_11.seq
         (1607 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    30   0.21 
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    27   2.0  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   2.6  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 29.9 bits (64), Expect = 0.21
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -2

Query: 487  SKAHTGPAGGDTHRPAHSGGGTPSPTRARTN--SAGDRISGS 368
            S++ +G A G   R     GG+ S +R+R+   SAG R SGS
Sbjct: 1105 SRSRSGSAKGSRSRSRSGSGGSRSRSRSRSRSQSAGSRKSGS 1146


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 26.6 bits (56), Expect = 2.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 472 GPAGGDTHRPAHSGGGTPSPTRARTN 395
           G   GD  RPA+SG   PS  + +T+
Sbjct: 100 GDRNGDGGRPAYSGNSDPSMDQVKTD 125


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 26.2 bits (55), Expect = 2.6
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = -2

Query: 553 LSRQETASSSHRVANVLAVPAASKAHTGPAGGDTHRPAHSGG 428
           +SR     SS+R A     P       G  G   H+P + GG
Sbjct: 13  MSRSSYTRSSYRSAYYGGPPEIGGTGAGALGSQQHQPPYGGG 54


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,082,474
Number of Sequences: 2352
Number of extensions: 20430
Number of successful extensions: 40
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 68
effective length of database: 404,043
effective search space used: 188688081
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)