Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_F05_e326_11.seq
         (1607 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   4.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   7.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   7.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   7.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   9.8  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = -2

Query: 463 GGDTHRPAHSGGGTPSPTRARTNSAGDRISGSSTSLASPIRDGMN 329
           G   H P H+  G PS T A    A     GS +  ASP   G++
Sbjct: 209 GYGRHLPGHAQMGRPSYTTA--TMATTSTPGSGSLPASPADSGVS 251


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 99  NIQIHNTSIHNTYHIYALNSRT 164
           N Q++  SIHN Y ++     T
Sbjct: 578 NAQVNKRSIHNNYPVHTFGRLT 599


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +1

Query: 424  YHRHYAPDGACRPPP 468
            YH H   +G   PPP
Sbjct: 1742 YHEHAMTEGCASPPP 1756


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +1

Query: 424  YHRHYAPDGACRPPP 468
            YH H   +G   PPP
Sbjct: 1738 YHEHAMTEGCASPPP 1752


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -2

Query: 445 PAHSGGGTPSPTRARTNSAGDRISGSSTSLASPIRDGMN 329
           P++ GGG+ SP+ +  +S    +  S TSL S    G++
Sbjct: 81  PSYPGGGSSSPSPSSPSSFFSSV--SPTSLGSENYTGIS 117


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 303,744
Number of Sequences: 438
Number of extensions: 6892
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 56702250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)