Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_F04_e318_12.seq
         (1602 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    25   2.1  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   6.3  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   8.3  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   8.3  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 737 GDPPCIWLAPNSPVVFKFAVEFITGLL 657
           G+PPC  L P++P V++   +    LL
Sbjct: 362 GEPPCGQLNPDNPNVYEILEKLYKDLL 388


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 394 NVPVTGPGSGFMASYLKFLQGERDTS 471
           ++P   P  GF+  +L  LQG  D S
Sbjct: 200 SLPSISPSGGFLPKWLPPLQGFSDPS 225


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -3

Query: 541 CWCYCLYLFSTKSTSWRLCRPA-VEKCHVLLVKI 443
           C  YC  L+   S S +L R A V K  +L VKI
Sbjct: 283 CLSYCFNLYHLASKSNQLSREAKVTKTVLLGVKI 316


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -3

Query: 541 CWCYCLYLFSTKSTSWRLCRPA-VEKCHVLLVKI 443
           C  YC  L+   S S +L R A V K  +L VKI
Sbjct: 283 CLSYCFNLYHLASKSNQLSREAKVTKTVLLGVKI 316


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,113
Number of Sequences: 336
Number of extensions: 4652
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 48447025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)