Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_F03_e310_11.seq
         (1602 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O28059 Cluster: Valyl-tRNA synthetase; n=3; Euryarchaeo...    36   3.9  
UniRef50_UPI000049A5EB Cluster: hypothetical protein 15.t00036; ...    35   6.9  
UniRef50_Q8IBH6 Cluster: Putative uncharacterized protein PF07_0...    34   9.1  

>UniRef50_O28059 Cluster: Valyl-tRNA synthetase; n=3;
           Euryarchaeota|Rep: Valyl-tRNA synthetase - Archaeoglobus
           fulgidus
          Length = 863

 Score = 35.5 bits (78), Expect = 3.9
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +1

Query: 244 FCWYRYTNNLISFSASNIYFAS--KKNEIRFLLYFTISHLCRILVSMFPFL 390
           F WY Y +N +    + +Y  S  +K   +F+L + +  L R+L  + PF+
Sbjct: 631 FTWYEYADNYLEIVKNRLYSGSEEEKRAAKFVLSYALDVLTRLLAPITPFM 681


>UniRef50_UPI000049A5EB Cluster: hypothetical protein 15.t00036;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 15.t00036 - Entamoeba histolytica HM-1:IMSS
          Length = 522

 Score = 34.7 bits (76), Expect = 6.9
 Identities = 32/98 (32%), Positives = 47/98 (47%)
 Frame = +1

Query: 199 VKDEILYFLPSNNMQFCWYRYTNNLISFSASNIYFASKKNEIRFLLYFTISHLCRILVSM 378
           ++D ++Y L  ++  F    Y NN I    +N+    +K+++R LLYF       IL S+
Sbjct: 58  LRDLLIYLLVHSSPIFPEI-YNNNAILIMKNNLLI--QKHQLRALLYFIPIEQREILYSL 114

Query: 379 FPFLILHSTIKYELRI*KFNVGLFK*SQIF*CYLPMFL 492
           F FL L S I  E  +  F   +FK S  F     M L
Sbjct: 115 FEFLHL-SRIPIEKIVPVFTKIIFKTSTKFQTKFSMIL 151


>UniRef50_Q8IBH6 Cluster: Putative uncharacterized protein
           PF07_0118; n=3; Plasmodium|Rep: Putative uncharacterized
           protein PF07_0118 - Plasmodium falciparum (isolate 3D7)
          Length = 5561

 Score = 34.3 bits (75), Expect = 9.1
 Identities = 32/164 (19%), Positives = 73/164 (44%), Gaps = 3/164 (1%)
 Frame = +1

Query: 73  HEGEIIVLSRKEITQV*NXXXXXXXXXXXXXXXXNDSCHEDYVKDEILYFL-PSNNMQFC 249
           H G  I   +K+ + + N                 +  H+D++K  +++    + N+QF 
Sbjct: 346 HLGNRICTKKKKKSNINNDNYYYNDIKNKYIYTLENDIHQDHIKVNVIHIQNKTENIQFV 405

Query: 250 WYRYTNNLISFSASNIYFASKKNEIRFLLYFTISHLCRILVSMFPFLILHST--IKYELR 423
              Y    + +S + ++F +  N+ + L YFT S       +    + + +   + +++ 
Sbjct: 406 -LPYKPIRMFYSNNFLFFVNIINKSKDLQYFTYSIYNNNHKNQIRIVYVSAIHPLLHDII 464

Query: 424 I*KFNVGLFK*SQIF*CYLPMFLWDKL*K*RERSRGQNPIRIKR 555
           + K N  LFK  + F     +F+W  +   +E+++ +N I+ K+
Sbjct: 465 VDKNNFSLFKKCKYFYEEEKLFIWTDMSLPKEKNKIKNKIKKKQ 508


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,012,605,951
Number of Sequences: 1657284
Number of extensions: 17702963
Number of successful extensions: 39784
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 37460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39768
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 173006894775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)