Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_E12_e381_10.seq
(1548 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55463| Best HMM Match : OPA3 (HMM E-Value=0) 62 2e-09
SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 1e-08
SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20) 56 1e-07
SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 5e-07
SB_14227| Best HMM Match : Cofilin_ADF (HMM E-Value=0.0013) 47 5e-05
SB_33596| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.46
SB_49450| Best HMM Match : SH3_1 (HMM E-Value=6.9e-17) 32 1.4
SB_38286| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.4
SB_41789| Best HMM Match : Mucin (HMM E-Value=0.56) 31 3.3
SB_41192| Best HMM Match : Mucin (HMM E-Value=0.56) 31 3.3
SB_36002| Best HMM Match : Peptidase_A17 (HMM E-Value=9.3e-41) 31 3.3
SB_20964| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.3
SB_9453| Best HMM Match : Mucin (HMM E-Value=0.56) 31 3.3
SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.7
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.7
SB_44895| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 10.0
SB_8542| Best HMM Match : PT (HMM E-Value=4) 29 10.0
>SB_55463| Best HMM Match : OPA3 (HMM E-Value=0)
Length = 387
Score = 61.7 bits (143), Expect = 2e-09
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Frame = +3
Query: 135 MASGVTVSDACKTTYEEIKKDKKH-RYVVFYIRDEKQIDVETVGGRNAE--YDSFLEDLQ 305
M +G+ + + EIKK RY++F + ++K+ V E ++ L+DL
Sbjct: 247 MEAGLNIKGEVTDGWNEIKKAASGLRYIIFKMDEKKENVVFEKKKMKCECSHEDVLDDLP 306
Query: 306 KGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKS 485
E RY + +Y + E + + KL L+ WCPD ++K +M+ +++F +KK
Sbjct: 307 ---ADEPRYIALNLDYKNV-----EGADRSKLVLIFWCPDNCEIKSRMVSAATFQDVKKK 358
Query: 486 LVGVQKYIQATDLSEASQEAVEEKLR 563
G K ++ + SE S EA++E+L+
Sbjct: 359 CPGGAKCLEIQERSELSFEALKEELK 384
>SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 58.8 bits (136), Expect = 1e-08
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Frame = +3
Query: 141 SGVTVSDACKTTYEEIKKDKKH-RYVVFYIRDEKQIDVETVGGRNAE--YDSFLEDLQKG 311
+G+ + + EIK RY +F + ++K+ V E +D L+DL
Sbjct: 2 AGLNIKSDVTDGWNEIKMVASGLRYTIFKMDEKKENVVMEKKKMITECCHDDVLDDLP-- 59
Query: 312 GTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLV 491
T E RY + +Y ++ E +++ KL L+ WCPD +K KM+ +++F + K
Sbjct: 60 -TDEPRYVALNLDYKNE-----EGAERSKLVLIFWCPDNCGIKNKMVSAATFKEVMKKCP 113
Query: 492 GVQKYIQATDLSEASQEAVEEKLR 563
G K ++ D + S EA++EKL+
Sbjct: 114 GGAKCLEIQDRFDLSFEALKEKLK 137
>SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20)
Length = 151
Score = 55.6 bits (128), Expect = 1e-07
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 7/150 (4%)
Frame = +3
Query: 141 SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDV-----ETVGGRNAEYDS--FLED 299
SG+ V D + +K K H+Y +F I DE + V ++V E D F +
Sbjct: 4 SGIKVDDESLKLSQTMKSMKTHKYAIFKICDEANMVVIDQTFKSVVTNTREEDRAIFYQM 63
Query: 300 LQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALK 479
++K E RY L+D ++ + E L +SWC D A ++KKM +S+ D ++
Sbjct: 64 VEKLSDREPRYILYDMKFPRK----EEKRIFNNLVFISWCSDKAPIEKKMKLASTQDYVR 119
Query: 480 KSLVGVQKYIQATDLSEASQEAVEEKLRAT 569
K + A D + + + K T
Sbjct: 120 KKFSEATTSVNANDFDDLDYDEIAAKAEKT 149
>SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 53.2 bits (122), Expect = 5e-07
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Frame = +3
Query: 141 SGVTVSDACKTTYEEIK-KDKKHRYVVFYIRDE----------KQIDVETVGGRNAEYDS 287
SG+ + D Y+ ++ K+K H++ F I D+ K++D T A +D
Sbjct: 4 SGIKIDDESLHLYQTMQGKEKSHKFATFKISDDGKMVVIDHILKRVDTHTREEDRAIFDQ 63
Query: 288 FLEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSF 467
LE L E RY L+D + + + L + WC D A +KK+M+ +++
Sbjct: 64 MLEKLSDS---EPRYILYDLNFPRK-----DGRAFHHLVYIFWCSDNAPIKKRMVSAATN 115
Query: 468 DALKKSLVGVQKYIQATDLSEASQEAVEEK 557
+ LK V V+K Q D ++ + + + +K
Sbjct: 116 ELLKTKFV-VKKVFQINDRADLNYDDIADK 144
>SB_14227| Best HMM Match : Cofilin_ADF (HMM E-Value=0.0013)
Length = 310
Score = 46.8 bits (106), Expect = 5e-05
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 357 HQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSE 530
H+ Q A FL C D A +KKKML S+++ LKK G++KY +A+++ E
Sbjct: 241 HKTQDHRSALSDLVFFLFDRCSDEAPIKKKMLAGSTWEYLKKKFDGLKKYFEASEICE 298
>SB_33596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 881
Score = 33.5 bits (73), Expect = 0.46
Identities = 31/107 (28%), Positives = 39/107 (36%), Gaps = 1/107 (0%)
Frame = +2
Query: 515 DRPLGGVAGGRRGETPRH*PSVNPMHLALPSTPPSHTRYERRVRGPLSHTVVRDRRPPIH 694
D+ G V +G + V P A PS PSH +H P H
Sbjct: 414 DKFTGPVIPASQGNSGAMQHGVAPPVSACPSHQPSHATMSDARLNTSTHLA-----PTPH 468
Query: 695 SNGRRPSAHAQTDAAXRFTPTGRRPPVHSS-TGGVPYYTTNVSVYRG 832
+ RP HA + A PT R PP H S PY+ T+ G
Sbjct: 469 HSSDRPH-HATSYNAPSGMPTHREPPPHPSFASHQPYHVTSCDALSG 514
>SB_49450| Best HMM Match : SH3_1 (HMM E-Value=6.9e-17)
Length = 288
Score = 31.9 bits (69), Expect = 1.4
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 577 SESDAF-SSPLNSPLTHTLRTTRARPLVTYRGSRPPPPNTLQRAAP 711
++S +F SS + SPLT L RPLVT S PP T Q AAP
Sbjct: 20 TQSPSFTSSVVTSPLTVNL----CRPLVTIATSCPPVTTTAQAAAP 61
>SB_38286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 31.9 bits (69), Expect = 1.4
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 577 SESDAF-SSPLNSPLTHTLRTTRARPLVTYRGSRPPPPNTLQRAAP 711
++S +F SS + SPLT L RPLVT S PP T Q AAP
Sbjct: 20 TQSPSFTSSVVTSPLTVNL----CRPLVTIATSCPPVTTTAQAAAP 61
>SB_41789| Best HMM Match : Mucin (HMM E-Value=0.56)
Length = 683
Score = 30.7 bits (66), Expect = 3.3
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 12/96 (12%)
Frame = +2
Query: 641 VRGPLSHTV-------VRDRRPPIHSNGRRPSAHAQTDAAXRFTPTGRR-----PPVHSS 784
+ GPLS+T R R+P +H N S H Q +P +R +++
Sbjct: 159 LNGPLSYTTNSYATPYFRARQPQVHPNYNMGSFHFQNRQKINTSPDPQRYYTEKTAMNAH 218
Query: 785 TGGVPYYTTNVSVYRGPLPIPPQYXKRPCAGXFYXY 892
GVP T +YR LP Q KRP +Y +
Sbjct: 219 VYGVP-VTAGHQMYRAHLPQTVQ-AKRPTFSDYYGH 252
>SB_41192| Best HMM Match : Mucin (HMM E-Value=0.56)
Length = 683
Score = 30.7 bits (66), Expect = 3.3
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 12/96 (12%)
Frame = +2
Query: 641 VRGPLSHTV-------VRDRRPPIHSNGRRPSAHAQTDAAXRFTPTGRR-----PPVHSS 784
+ GPLS+T R R+P +H N S H Q +P +R +++
Sbjct: 159 LNGPLSYTTNSYATPYFRARQPQVHPNYNMGSFHFQNRQKINTSPDPQRYYTEKTAMNAH 218
Query: 785 TGGVPYYTTNVSVYRGPLPIPPQYXKRPCAGXFYXY 892
GVP T +YR LP Q KRP +Y +
Sbjct: 219 VYGVP-VTAGHQMYRAHLPQTVQ-AKRPTFSDYYGH 252
>SB_36002| Best HMM Match : Peptidase_A17 (HMM E-Value=9.3e-41)
Length = 193
Score = 30.7 bits (66), Expect = 3.3
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 246 DVETVGGRNAEYDSFLEDLQKGGT---GECRYGLFDFEYTHQCQGTSEASKK 392
D E G R + S+L+DL++ C YG+ E T+ G +ASKK
Sbjct: 83 DEELTGERKKRWLSWLDDLKRVKEVRIARCVYGVSGAEVTYSLHGFGDASKK 134
>SB_20964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 30.7 bits (66), Expect = 3.3
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 246 DVETVGGRNAEYDSFLEDLQKGGT---GECRYGLFDFEYTHQCQGTSEASKK 392
D E G R + S+L+DL++ C YG+ E T+ G +ASKK
Sbjct: 139 DEELTGERKKRWLSWLDDLKRVKEVRIARCVYGVSGAEVTYSLHGFGDASKK 190
>SB_9453| Best HMM Match : Mucin (HMM E-Value=0.56)
Length = 642
Score = 30.7 bits (66), Expect = 3.3
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 12/96 (12%)
Frame = +2
Query: 641 VRGPLSHTV-------VRDRRPPIHSNGRRPSAHAQTDAAXRFTPTGRR-----PPVHSS 784
+ GPLS+T R R+P +H N S H Q +P +R +++
Sbjct: 159 LNGPLSYTTNSYATPYFRARQPQVHPNYNMGSFHFQNRQKINTSPDPQRYYTEKTAMNAH 218
Query: 785 TGGVPYYTTNVSVYRGPLPIPPQYXKRPCAGXFYXY 892
GVP T +YR LP Q KRP +Y +
Sbjct: 219 VYGVP-VTAGHQMYRAHLPQTVQ-AKRPTFSDYYGH 252
>SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1681
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 246 DVETVGGRNAEYDSFLEDLQKGGT---GECRYGLFDFEYTHQCQGTSEASKK 392
D E G R + S+L+DL++ C YG + E T+ G +ASKK
Sbjct: 422 DEELTGERKKRWLSWLDDLKRVKEVRIARCVYGGSEAEVTYSLHGFGDASKK 473
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 29.9 bits (64), Expect = 5.7
Identities = 23/79 (29%), Positives = 34/79 (43%)
Frame = +2
Query: 485 SRRRTEVHTGDRPLGGVAGGRRGETPRH*PSVNPMHLALPSTPPSHTRYERRVRGPLSHT 664
++RRT T P RRG P +P P+T + R ++ GP + T
Sbjct: 5903 AKRRTNGSTTRTPEVKATPSRRGGAVSRIPRSSPA--GSPATSFTRERSRDKLSGPAAAT 5960
Query: 665 VVRDRRPPIHSNGRRPSAH 721
+ R+R P +G SAH
Sbjct: 5961 LTRERSPSFTRSG---SAH 5976
>SB_44895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 29.1 bits (62), Expect = 10.0
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = -3
Query: 352 YSKSKRPYLHSPVP-PFCRS--SRKLSYSALRPP 260
YS RPY HSPV P+C S R YS + P
Sbjct: 112 YSPVDRPYCHSPVDRPYCHSPVDRPYCYSPVDHP 145
>SB_8542| Best HMM Match : PT (HMM E-Value=4)
Length = 650
Score = 29.1 bits (62), Expect = 10.0
Identities = 37/147 (25%), Positives = 55/147 (37%), Gaps = 12/147 (8%)
Frame = +2
Query: 560 PRH*PSVNPMHLALPSTPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQT--- 730
PR+ PS NP LPS P +RY R + + IHS G P + Q+
Sbjct: 223 PRYYPSGNPQPWFLPSGNP-QSRYYRSWKSTAQVLPFLE----IHSPGITPLGNLQSRYY 277
Query: 731 ---DAAXRFTPTGRRPPVHSSTGG-----VPYYTTNVSVYRGPLPIPPQYXKRPCAGXFY 886
+ R+ P+G P + +G P+ Y P P Y P
Sbjct: 278 PSGNPQSRYYPSGNPQPRYYPSGNPQPSYYPFGNPQPRYYPYGNPQPKYY---PSGNPQS 334
Query: 887 XYFFLXXIHTTFY-FKNPXAFXFPSGS 964
Y+ + +Y + NP +PSG+
Sbjct: 335 RYYLYGNPQSRYYPYGNPQPKYYPSGN 361
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,771,877
Number of Sequences: 59808
Number of extensions: 772688
Number of successful extensions: 2027
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2007
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 5047244110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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