Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_E12_e381_10.seq
(1548 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein. 107 2e-23
AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated... 107 2e-23
L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein. 80 4e-15
AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated... 80 4e-15
AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated... 78 2e-14
Z67734-2|CAA91528.2| 247|Caenorhabditis elegans Hypothetical pr... 33 0.54
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 31 1.7
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 31 1.7
Z81583-2|CAB04670.1| 314|Caenorhabditis elegans Hypothetical pr... 29 6.7
AL132948-33|CAD57708.2| 734|Caenorhabditis elegans Hypothetical... 29 8.8
AL132948-32|CAD31833.3| 731|Caenorhabditis elegans Hypothetical... 29 8.8
AC024801-11|AAN84814.2| 138|Caenorhabditis elegans Hypothetical... 29 8.8
>L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein.
Length = 152
Score = 107 bits (257), Expect = 2e-23
Identities = 58/152 (38%), Positives = 91/152 (59%), Gaps = 5/152 (3%)
Frame = +3
Query: 135 MASGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGGRNAEYDSFLEDLQK- 308
MASGV V +CK Y+ + +H Y++F I +++ I VE VG +NA Y F+E+++K
Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60
Query: 309 -GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKS 485
ECRY D E T Q QG S K+ + +CPD A V+++MLY+SS ALK S
Sbjct: 61 VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKAS 120
Query: 486 LVGVQK--YIQATDLSEASQEAVEEKLRATDR 575
L G++ +QA+++S+ +++V+ L + R
Sbjct: 121 L-GLESLFQVQASEMSDLDEKSVKSDLMSNQR 151
>AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated
protein 60, isoform c protein.
Length = 152
Score = 107 bits (257), Expect = 2e-23
Identities = 58/152 (38%), Positives = 91/152 (59%), Gaps = 5/152 (3%)
Frame = +3
Query: 135 MASGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGGRNAEYDSFLEDLQK- 308
MASGV V +CK Y+ + +H Y++F I +++ I VE VG +NA Y F+E+++K
Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60
Query: 309 -GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKS 485
ECRY D E T Q QG S K+ + +CPD A V+++MLY+SS ALK S
Sbjct: 61 VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKAS 120
Query: 486 LVGVQK--YIQATDLSEASQEAVEEKLRATDR 575
L G++ +QA+++S+ +++V+ L + R
Sbjct: 121 L-GLESLFQVQASEMSDLDEKSVKSDLMSNQR 151
>L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein.
Length = 165
Score = 80.2 bits (189), Expect = 4e-15
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 18/160 (11%)
Frame = +3
Query: 135 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETV--------------GGR 269
M+SGV V +T+++++ + +K +RY++F I DE ++ VE
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 270 NAEYDSFLEDLQK--GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKK 443
A +D F+ED++ +CRY +FDF++T G SK K+ + CPD A +KK
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFTCSRVGAG-TSKMDKIIFLQICPDGASIKK 118
Query: 444 KMLYSSSFDALKKSL-VGVQKYIQATDLSEASQEAVEEKL 560
KM+Y+SS A+K SL G Q +D SE S + + KL
Sbjct: 119 KMVYASSAAAIKTSLGTGKILQFQVSDESEMSHKELLNKL 158
>AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated
protein 60, isoform a protein.
Length = 165
Score = 80.2 bits (189), Expect = 4e-15
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 18/160 (11%)
Frame = +3
Query: 135 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETV--------------GGR 269
M+SGV V +T+++++ + +K +RY++F I DE ++ VE
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 270 NAEYDSFLEDLQK--GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKK 443
A +D F+ED++ +CRY +FDF++T G SK K+ + CPD A +KK
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFTCSRVGAG-TSKMDKIIFLQICPDGASIKK 118
Query: 444 KMLYSSSFDALKKSL-VGVQKYIQATDLSEASQEAVEEKL 560
KM+Y+SS A+K SL G Q +D SE S + + KL
Sbjct: 119 KMVYASSAAAIKTSLGTGKILQFQVSDESEMSHKELLNKL 158
>AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated
protein 60, isoform b protein.
Length = 212
Score = 77.8 bits (183), Expect = 2e-14
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 18/154 (11%)
Frame = +3
Query: 135 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETV--------------GGR 269
M+SGV V +T+++++ + +K +RY++F I DE ++ VE
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 270 NAEYDSFLEDLQK--GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKK 443
A +D F+ED++ +CRY +FDF++T G SK K+ + CPD A +KK
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFTCSRVGAG-TSKMDKIIFLQICPDGASIKK 118
Query: 444 KMLYSSSFDALKKSL-VGVQKYIQATDLSEASQE 542
KM+Y+SS A+K SL G Q +D SE S +
Sbjct: 119 KMVYASSAAAIKTSLGTGKILQFQVSDESEMSHK 152
Score = 47.6 bits (108), Expect = 2e-05
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Frame = +3
Query: 360 QCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQK--YIQATDLSEA 533
Q SE S K+ L++ CPD A V+++MLY+SS ALK SL G++ +QA+++S+
Sbjct: 142 QVSDESEMSHKE---LLNNCPDNAPVRRRMLYASSVRALKASL-GLESLFQVQASEMSDL 197
Query: 534 SQEAVEEKLRATDR 575
+++V+ L + R
Sbjct: 198 DEKSVKSDLMSNQR 211
>Z67734-2|CAA91528.2| 247|Caenorhabditis elegans Hypothetical
protein B0198.2 protein.
Length = 247
Score = 33.1 bits (72), Expect = 0.54
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Frame = +2
Query: 614 PSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQTDAAXRFTPTGRRPP---VHS- 781
P+ +RY +R + + + P + +G P++ Q + +P G RPP +HS
Sbjct: 53 PAPSRYPEPLRPQTVNQMRIEHEPKCNGSGSSPASFVQYNNNNAQSPIGYRPPMQFIHSP 112
Query: 782 -STGGVPYYT-TNVSVYRGPLP-IPPQYXKRP 868
S G+P T + R + IPP+ +RP
Sbjct: 113 VSENGIPRMVHTGGRLPRSSIGCIPPRQAERP 144
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 31.5 bits (68), Expect = 1.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 586 DAFSSPLNSPLTHTLRTTRARPLVTYRGSRPPPP 687
D + P++ P T T P VT R +RPPPP
Sbjct: 678 DEYDVPMDFPDTEAPPLTTRPPPVTVRNTRPPPP 711
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 31.5 bits (68), Expect = 1.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 586 DAFSSPLNSPLTHTLRTTRARPLVTYRGSRPPPP 687
D + P++ P T T P VT R +RPPPP
Sbjct: 678 DEYDVPMDFPDTEAPPLTTRPPPVTVRNTRPPPP 711
>Z81583-2|CAB04670.1| 314|Caenorhabditis elegans Hypothetical
protein T02G6.2 protein.
Length = 314
Score = 29.5 bits (63), Expect = 6.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 571 TVSESDAFSSPLNSPLTHTLRTTRARPLVTYRGSRPPPPNTLQ 699
T + ++ S L HT+R+T P+V RP PP+ ++
Sbjct: 148 TANSANGVSLTLPRVKNHTIRSTDTVPIVRVPAGRPRPPSKIE 190
>AL132948-33|CAD57708.2| 734|Caenorhabditis elegans Hypothetical
protein Y39B6A.43b protein.
Length = 734
Score = 29.1 bits (62), Expect = 8.8
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 913 MYXXKKKIXIKXPGARPLXILRWYWKGAPI 824
+Y K K PG+ ++ +YWKG PI
Sbjct: 554 IYTAKGKNSESFPGSPEYAVIVYYWKGEPI 583
>AL132948-32|CAD31833.3| 731|Caenorhabditis elegans Hypothetical
protein Y39B6A.43a protein.
Length = 731
Score = 29.1 bits (62), Expect = 8.8
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 913 MYXXKKKIXIKXPGARPLXILRWYWKGAPI 824
+Y K K PG+ ++ +YWKG PI
Sbjct: 551 IYTAKGKNSESFPGSPEYAVIVYYWKGEPI 580
>AC024801-11|AAN84814.2| 138|Caenorhabditis elegans Hypothetical
protein Y50D7A.10 protein.
Length = 138
Score = 29.1 bits (62), Expect = 8.8
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +3
Query: 363 CQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQE 542
C+ S+ + L+ +CP+ + + +MLY+ S + + V K + D+ E E
Sbjct: 74 CKKHSDERISYPMLLIYYCPNGSSPELQMLYAGSRNFIVNE-CHVSKNTEIRDIDEIDDE 132
Query: 543 AVEEK 557
+E K
Sbjct: 133 LLESK 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,741,901
Number of Sequences: 27780
Number of extensions: 577168
Number of successful extensions: 1843
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1827
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4462926140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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