Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_E11_e373_09.seq
         (1535 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    26   0.64 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    24   2.6  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   6.0  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 26.2 bits (55), Expect = 0.64
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 687 HLPKRQDLQGSSCLWTNE 740
           HL K+Q L G +CLW+ +
Sbjct: 541 HLNKKQILGGEACLWSEQ 558


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 144 VRRQPASHSKCSRGTKSLPS 203
           V+ +P  HS C+ G+  LP+
Sbjct: 28  VKSEPQLHSPCATGSNGLPA 47


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 337 ETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMS 453
           +TLG   N I EP+ +     T K ++  A AP   D++
Sbjct: 380 QTLGGSSNEIVEPVPQPVEEVTQKPSSTKAPAPPSRDLT 418


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 276,318
Number of Sequences: 336
Number of extensions: 5919
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 46193675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)