Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_E11_e373_09.seq
(1535 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g08690.1 68418.m01034 ATP synthase beta chain 2, mitochondria... 308 5e-84
At5g08680.1 68418.m01033 ATP synthase beta chain, mitochondrial,... 308 5e-84
At5g08670.1 68418.m01032 ATP synthase beta chain 1, mitochondria... 308 5e-84
At2g07698.1 68415.m00949 ATP synthase alpha chain, mitochondrial... 63 5e-10
At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putati... 44 2e-04
At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putati... 44 2e-04
At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATP... 44 2e-04
At1g20260.2 68414.m02530 vacuolar ATP synthase subunit B, putati... 44 2e-04
At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putati... 44 2e-04
At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit... 33 0.50
At3g54040.1 68416.m05975 photoassimilate-responsive protein-rela... 31 2.0
>At5g08690.1 68418.m01034 ATP synthase beta chain 2, mitochondrial
identical to SP|P83484 ATP synthase beta chain 2,
mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; strong similarity to SP|P17614 ATP synthase
beta chain, mitochondrial precursor (EC 3.6.3.14)
{Nicotiana plumbaginifolia}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain; supporting cDNA
gi|26452187|dbj|AK118582.1|
Length = 556
Score = 308 bits (757), Expect = 5e-84
Identities = 157/226 (69%), Positives = 175/226 (77%), Gaps = 4/226 (1%)
Frame = +1
Query: 136 DVQFEDN--LPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVHDSG 309
DV+FED LPPI+ +LEVQ+ RLVLEV+ HLG+N VRTIAMDGTEGLVRG+ V ++G
Sbjct: 95 DVRFEDQEGLPPIMTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLNTG 154
Query: 310 SPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKV 489
+PI +PVG TLGRI+NV+GEPIDERG I T+ IH +AP VD++ QEIL TGIKV
Sbjct: 155 APITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKV 214
Query: 490 VDLLAPYAXXXXXXXXXXXXXXXTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHE 669
VDLLAPY TVLIMELINNVAKAHGG+SVFAGVGERTREGNDLY E
Sbjct: 215 VDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYRE 274
Query: 670 MIESGVISL--KDKTSKVALVYGQMNEPPGARARVALTGLTVAEYF 801
MIESGVI L K SK ALVYGQMNEPPGARARV LTGLTVAEYF
Sbjct: 275 MIESGVIKLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYF 320
Score = 85.4 bits (202), Expect = 9e-17
Identities = 53/94 (56%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Frame = +2
Query: 800 FRDQEGQDVLLFIDNIFRFTQAGSEXSALLGRIPSAXVTSP-L*H*HGYYAXKNYXFXEG 976
FRD EGQDVLLFIDNIFRFTQA SE SALLGRIPSA P L G + +G
Sbjct: 320 FRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLASDLGALQERITTTKKG 379
Query: 977 XHYFCTSYYVPADDLTDPA-RXXIXXLDAPQVXS 1075
+ YVPADDLTDPA LDA V S
Sbjct: 380 SITSVQAIYVPADDLTDPAPATTFAHLDATTVLS 413
>At5g08680.1 68418.m01033 ATP synthase beta chain, mitochondrial,
putative strong similarity to SP|P83483 ATP synthase
beta chain 1, mitochondrial precursor (EC 3.6.3.14)
{Arabidopsis thaliana}, SP|P17614 ATP synthase beta
chain, mitochondrial precursor (EC 3.6.3.14) {Nicotiana
plumbaginifolia}; contains Pfam profiles PF00006: ATP
synthase alpha/beta family nucleotide-binding domain,
PF00306: ATP synthase ab C terminal, PF02874: ATP
synthase alpha/beta family beta-barrel domain
Length = 559
Score = 308 bits (757), Expect = 5e-84
Identities = 157/226 (69%), Positives = 175/226 (77%), Gaps = 4/226 (1%)
Frame = +1
Query: 136 DVQFEDN--LPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVHDSG 309
DV+FED LPPI+ +LEVQ+ RLVLEV+ HLG+N VRTIAMDGTEGLVRG+ V ++G
Sbjct: 98 DVRFEDQEGLPPIMTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLNTG 157
Query: 310 SPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKV 489
+PI +PVG TLGRI+NV+GEPIDERG I T+ IH +AP VD++ QEIL TGIKV
Sbjct: 158 APITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKV 217
Query: 490 VDLLAPYAXXXXXXXXXXXXXXXTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHE 669
VDLLAPY TVLIMELINNVAKAHGG+SVFAGVGERTREGNDLY E
Sbjct: 218 VDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYRE 277
Query: 670 MIESGVISL--KDKTSKVALVYGQMNEPPGARARVALTGLTVAEYF 801
MIESGVI L K SK ALVYGQMNEPPGARARV LTGLTVAEYF
Sbjct: 278 MIESGVIKLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYF 323
Score = 85.4 bits (202), Expect = 9e-17
Identities = 53/94 (56%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Frame = +2
Query: 800 FRDQEGQDVLLFIDNIFRFTQAGSEXSALLGRIPSAXVTSP-L*H*HGYYAXKNYXFXEG 976
FRD EGQDVLLFIDNIFRFTQA SE SALLGRIPSA P L G + +G
Sbjct: 323 FRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLASDLGALQERITTTKKG 382
Query: 977 XHYFCTSYYVPADDLTDPA-RXXIXXLDAPQVXS 1075
+ YVPADDLTDPA LDA V S
Sbjct: 383 SITSVQAIYVPADDLTDPAPATTFAHLDATTVLS 416
>At5g08670.1 68418.m01032 ATP synthase beta chain 1, mitochondrial
identical to SP|P83483 ATP synthase beta chain 1,
mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; strong similarity to SP|P17614 ATP synthase
beta chain, mitochondrial precursor (EC 3.6.3.14)
{Nicotiana plumbaginifolia}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain; supporting cDNA
gi|26452102|dbj|AK118538.1|
Length = 556
Score = 308 bits (757), Expect = 5e-84
Identities = 157/226 (69%), Positives = 175/226 (77%), Gaps = 4/226 (1%)
Frame = +1
Query: 136 DVQFEDN--LPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVHDSG 309
DV+FED LPPI+ +LEVQ+ RLVLEV+ HLG+N VRTIAMDGTEGLVRG+ V ++G
Sbjct: 95 DVRFEDQEGLPPIMTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLNTG 154
Query: 310 SPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKV 489
+PI +PVG TLGRI+NV+GEPIDERG I T+ IH +AP VD++ QEIL TGIKV
Sbjct: 155 APITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKV 214
Query: 490 VDLLAPYAXXXXXXXXXXXXXXXTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHE 669
VDLLAPY TVLIMELINNVAKAHGG+SVFAGVGERTREGNDLY E
Sbjct: 215 VDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYRE 274
Query: 670 MIESGVISL--KDKTSKVALVYGQMNEPPGARARVALTGLTVAEYF 801
MIESGVI L K SK ALVYGQMNEPPGARARV LTGLTVAEYF
Sbjct: 275 MIESGVIKLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYF 320
Score = 85.4 bits (202), Expect = 9e-17
Identities = 53/94 (56%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Frame = +2
Query: 800 FRDQEGQDVLLFIDNIFRFTQAGSEXSALLGRIPSAXVTSP-L*H*HGYYAXKNYXFXEG 976
FRD EGQDVLLFIDNIFRFTQA SE SALLGRIPSA P L G + +G
Sbjct: 320 FRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLASDLGALQERITTTKKG 379
Query: 977 XHYFCTSYYVPADDLTDPA-RXXIXXLDAPQVXS 1075
+ YVPADDLTDPA LDA V S
Sbjct: 380 SITSVQAIYVPADDLTDPAPATTFAHLDATTVLS 413
>At2g07698.1 68415.m00949 ATP synthase alpha chain, mitochondrial,
putative very strong similarity to SP|P23413 ATP
synthase alpha chain, mitochondrial (EC 3.6.3.14)
{Brassica campestris}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF00306: ATP synthase ab C terminal, PF02874:
ATP synthase alpha/beta family beta-barrel domain
Length = 777
Score = 62.9 bits (146), Expect = 5e-10
Identities = 46/215 (21%), Positives = 86/215 (40%), Gaps = 8/215 (3%)
Frame = +1
Query: 217 VAQHLGENTVRTIAMDGTEGLVRGQPVHDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 396
+A +L V + G + G V +GS + +P G LGR+++ +G PID +G +
Sbjct: 334 MALNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPIDGKGAL 393
Query: 397 PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAXXXXXXXXXXXXXXXTVLIME 576
+ + +AP ++ E + TG+K VD L P T + ++
Sbjct: 394 SDHEQRRVEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGDRQTGKTTIAID 453
Query: 577 LINN--------VAKAHGGYSVFAGVGERTREGNDLYHEMIESGVISLKDKTSKVALVYG 732
I N +++ Y V+ +G++ L + E+ + LV
Sbjct: 454 TILNQKQINSRATSESETMYCVYVAIGQKRSTVGQLIQTLEEANALEYS------ILVAA 507
Query: 733 QMNEPPGARARVALTGLTVAEYFP*SGRSRCTVIY 837
++P + +G + EYF +G +IY
Sbjct: 508 TASDPAPLQFLAPYSGCAMGEYFRDNG-MHALIIY 541
>At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
very strong similarity to SP|P11574 Vacuolar ATP
synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
(Vacuolar proton pump B subunit) (V-ATPase 57 kDa
subunit) {Arabidopsis thaliana}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 487
Score = 44.4 bits (100), Expect = 2e-04
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +1
Query: 232 GENTVRTIAMDGTEGLV-RGQPVHDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDK 408
GE V + +GT G+ + V +G ++ PV + LGRI N G+PID PI +
Sbjct: 64 GEKAVVQV-FEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEA 122
Query: 409 TAAIHAEAPEFVDMSVQQEILVTGIKVVDLL 501
I + + + +E++ TGI +D++
Sbjct: 123 YLDISGSSINPSERTYPEEMIQTGISTIDVM 153
>At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
very strong similarity to SP|P11574 Vacuolar ATP
synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
(Vacuolar proton pump B subunit) (V-ATPase 57 kDa
subunit) {Arabidopsis thaliana}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 487
Score = 44.4 bits (100), Expect = 2e-04
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +1
Query: 232 GENTVRTIAMDGTEGLV-RGQPVHDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDK 408
GE V + +GT G+ + V +G ++ PV + LGRI N G+PID PI +
Sbjct: 64 GEKAVVQV-FEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEA 122
Query: 409 TAAIHAEAPEFVDMSVQQEILVTGIKVVDLL 501
I + + + +E++ TGI +D++
Sbjct: 123 YLDISGSSINPSERTYPEEMIQTGISTIDVM 153
>At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATPase
B subunit / vacuolar proton pump B subunit / V-ATPase 57
kDa subunit identical to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}
Length = 486
Score = 44.4 bits (100), Expect = 2e-04
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +1
Query: 232 GENTVRTIAMDGTEGLV-RGQPVHDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDK 408
GE V + +GT G+ + V +G ++ PV + LGRI N G+PID PI +
Sbjct: 63 GEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEA 121
Query: 409 TAAIHAEAPEFVDMSVQQEILVTGIKVVDLL 501
I + + + +E++ TGI +D++
Sbjct: 122 YLDISGSSINPSERTYPEEMIQTGISTIDVM 152
>At1g20260.2 68414.m02530 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
strong similarity to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 485
Score = 44.4 bits (100), Expect = 2e-04
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +1
Query: 232 GENTVRTIAMDGTEGLV-RGQPVHDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDK 408
GE V + +GT G+ + V +G ++ PV + LGRI N G+PID PI +
Sbjct: 63 GEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEA 121
Query: 409 TAAIHAEAPEFVDMSVQQEILVTGIKVVDLL 501
I + + + +E++ TGI +D++
Sbjct: 122 YLDISGSSINPSERTYPEEMIQTGISTIDVM 152
>At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
strong similarity to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 330
Score = 44.4 bits (100), Expect = 2e-04
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +1
Query: 232 GENTVRTIAMDGTEGLV-RGQPVHDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDK 408
GE V + +GT G+ + V +G ++ PV + LGRI N G+PID PI +
Sbjct: 63 GEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEA 121
Query: 409 TAAIHAEAPEFVDMSVQQEILVTGIKVVDLL 501
I + + + +E++ TGI +D++
Sbjct: 122 YLDISGSSINPSERTYPEEMIQTGISTIDVM 152
>At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit A
/ V-ATPase A subunit / vacuolar proton pump alpha
subunit / V-ATPase 69 kDa subunit identical to SP|O23654
Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)
(V-ATPase A subunit) (Vacuolar proton pump alpha
subunit) (V-ATPase 69 kDa subunit) {Arabidopsis
thaliana}
Length = 623
Score = 33.1 bits (72), Expect = 0.50
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 7/118 (5%)
Frame = +1
Query: 469 LVTGIKVVDLLAPYAXXXXXXXXXXXXXXXTVLIMELINNVAKAHGGYSVFAGVGERTRE 648
L+TG +V+D L P TV+ L ++ V+ G GER
Sbjct: 229 LLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDAVVYVGCGER--- 282
Query: 649 GNDLYHEMIESGVISL-------KDKTSKVALVYGQMNEPPGARARVALTGLTVAEYF 801
GN++ +++ +++ + + LV N P AR TG+T+AEYF
Sbjct: 283 GNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYF 340
>At3g54040.1 68416.m05975 photoassimilate-responsive protein-related
contains weak similarity to mRNA inducible by sucrose
and salicylic acid expressed in sugar-accumulating
tobacco plants (GI:871487) [Nicotiana tabacum]
Length = 183
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 151 DNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 282
+NLP + + + R +LE A GE T RT A+D EG+V
Sbjct: 29 ENLPTNMCSFSISASGKRCILETANVAGEFTCRTSAVD-VEGIV 71
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,410,798
Number of Sequences: 28952
Number of extensions: 498793
Number of successful extensions: 1347
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1338
length of database: 12,070,560
effective HSP length: 84
effective length of database: 9,638,592
effective search space used: 4115678784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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