Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_E10_e365_10.seq
         (1547 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   2.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   2.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   8.0  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    23   8.0  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   8.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   8.0  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    23   8.0  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 10/41 (24%), Positives = 23/41 (56%)
 Frame = +3

Query: 162 KRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGGEMWKSM 284
           K+P++A+ML++   R ++ +E    +   I +  G  W ++
Sbjct: 480 KKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHAL 520


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 10/41 (24%), Positives = 23/41 (56%)
 Frame = +3

Query: 162 KRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGGEMWKSM 284
           K+P++A+ML++   R ++ +E    +   I +  G  W ++
Sbjct: 372 KKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHAL 412


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = -1

Query: 167 PLRLVRHFIFF-PDGKNFEIIFELVHN 90
           P R +  +I   P G NFEI FE  +N
Sbjct: 307 PFRALTFWIIVAPAGSNFEIGFENYYN 333


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 622 KNYTNCGTDFGKSIP 578
           KNY NC  D GK  P
Sbjct: 42  KNYVNCLLDRGKCSP 56


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nuclear
            receptor protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +2

Query: 923  LILRLTGLGSSXLVCLHNXFSMVNFFKL 1006
            L+LRL  L S  L CL + F    FFKL
Sbjct: 364  LLLRLPALRSIGLKCLEHLF----FFKL 387


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -2

Query: 343 SLAYCSLALAAFSSQILLSFIDFHISPPFLAISVTFS 233
           +L YCSLA+      ++       I+ P L I V+ S
Sbjct: 412 ALVYCSLAIFVLCELLIEGTTSILINVPSLIIHVSTS 448


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 622 KNYTNCGTDFGKSIP 578
           KNY NC  D GK  P
Sbjct: 42  KNYVNCLLDRGKCSP 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 265,253
Number of Sequences: 336
Number of extensions: 4805
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 46603375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)